diff --git a/src/api/BamAlignment.cpp b/src/api/BamAlignment.cpp
index ce8ed3a..46f2bc7 100644
--- a/src/api/BamAlignment.cpp
+++ b/src/api/BamAlignment.cpp
@@ -870,7 +870,6 @@ void BamAlignment::RemoveTag(const std::string& tag)
     char* pOriginalTagData = (char*)TagData.data();
     char* pTagData = pOriginalTagData;
     const unsigned int originalTagDataLength = TagData.size();
-    unsigned int newTagDataLength = 0;
     unsigned int numBytesParsed = 0;
 
     // skip if tag not found
@@ -885,7 +884,6 @@ void BamAlignment::RemoveTag(const std::string& tag)
     pTagData -= 3;
     numBytesParsed -= 3;
     const unsigned int beginningTagDataLength = numBytesParsed;
-    newTagDataLength += beginningTagDataLength;
     std::memcpy(newTagData.Buffer, pOriginalTagData, numBytesParsed);
 
     // attemp to skip to next tag
diff --git a/src/api/algorithms/Sort.h b/src/api/algorithms/Sort.h
index eddf4f5..037cebc 100644
--- a/src/api/algorithms/Sort.h
+++ b/src/api/algorithms/Sort.h
@@ -60,9 +60,6 @@ struct API_EXPORT Sort
         return false;  // <-- unreachable
     }
 
-    //! Base class for our sorting function objects
-    typedef std::binary_function<BamAlignment, BamAlignment, bool> AlignmentSortBase;
-
     /*! \struct BamTools::Algorithms::Sort::ByName
         \brief Function object for comparing alignments by name
 
@@ -79,7 +76,7 @@ struct API_EXPORT Sort
             std::sort( a.begin(), a.end(), Sort::ByName(Sort::DescendingOrder) );
         \endcode
     */
-    struct ByName : public AlignmentSortBase
+    struct ByName
     {
 
         // ctor
@@ -120,7 +117,7 @@ struct API_EXPORT Sort
             std::sort( a.begin(), a.end(), Sort::ByPosition(Sort::DescendingOrder) );
         \endcode
     */
-    struct ByPosition : public AlignmentSortBase
+    struct ByPosition
     {
 
         // ctor
@@ -177,7 +174,7 @@ struct API_EXPORT Sort
         \endcode
     */
     template <typename T>
-    struct ByTag : public AlignmentSortBase
+    struct ByTag
     {
 
         // ctor
@@ -227,7 +224,7 @@ struct API_EXPORT Sort
             std::set<BamAlignment, Sort::Unsorted>; // STL set, unsorted (but probably insertion order)
         \endcode
     */
-    struct Unsorted : public AlignmentSortBase
+    struct Unsorted
     {
 
         // comparison function
diff --git a/src/api/internal/bam/BamMultiMerger_p.h b/src/api/internal/bam/BamMultiMerger_p.h
index d7b6249..8670ac5 100644
--- a/src/api/internal/bam/BamMultiMerger_p.h
+++ b/src/api/internal/bam/BamMultiMerger_p.h
@@ -49,7 +49,7 @@ struct API_NO_EXPORT MergeItem
 };
 
 template <typename Compare>
-struct API_NO_EXPORT MergeItemSorter : public std::binary_function<MergeItem, MergeItem, bool>
+struct API_NO_EXPORT MergeItemSorter
 {
 
 public:
diff --git a/src/utils/bamtools_fasta.cpp b/src/utils/bamtools_fasta.cpp
index 1138671..209f61f 100644
--- a/src/utils/bamtools_fasta.cpp
+++ b/src/utils/bamtools_fasta.cpp
@@ -175,7 +175,6 @@ bool Fasta::FastaPrivate::CreateIndex(const std::string& indexFilename)
     }
 
     // iterate through fasta entries
-    int currentId = 0;
     std::string header;
     std::string sequence;
     while (GetNextHeader(header)) {
@@ -207,9 +206,6 @@ bool Fasta::FastaPrivate::CreateIndex(const std::string& indexFilename)
 
         // store index entry
         Index.push_back(data);
-
-        // update ref Id
-        ++currentId;
     }
 
     // open index file