diff --git a/perl_tools/gvcf2fasta_nogaps.pl b/perl_tools/gvcf2fasta_nogaps.pl index 01d3a61..47a8c52 100644 --- a/perl_tools/gvcf2fasta_nogaps.pl +++ b/perl_tools/gvcf2fasta_nogaps.pl @@ -33,7 +33,7 @@ } my $info = $a[9]; my @infos = split(/:/,$info); - my $depth = $infos[3]; + my $depth = $infos[2]; my $call = $infos[0]; my @calls; if ($call =~ /\//){