diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-emr6.1/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-emr6.1/pom.xml
deleted file mode 100644
index 2ef5c79bb53..00000000000
--- a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-emr6.1/pom.xml
+++ /dev/null
@@ -1,519 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-  ~ Copyright 2015-2019 OpenCB
-  ~
-  ~ Licensed under the Apache License, Version 2.0 (the "License");
-  ~ you may not use this file except in compliance with the License.
-  ~ You may obtain a copy of the License at
-  ~
-  ~     http://www.apache.org/licenses/LICENSE-2.0
-  ~
-  ~ Unless required by applicable law or agreed to in writing, software
-  ~ distributed under the License is distributed on an "AS IS" BASIS,
-  ~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  ~ See the License for the specific language governing permissions and
-  ~ limitations under the License.
-  -->
-<project xmlns="http://maven.apache.org/POM/4.0.0"
-         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-
-    <parent>
-        <groupId>org.opencb.opencga</groupId>
-        <artifactId>opencga-storage-hadoop-deps</artifactId>
-        <version>3.0.0-SNAPSHOT</version>
-        <relativePath>../pom.xml</relativePath>
-    </parent>
-
-    <!--<groupId>org.opencb.opencga</groupId>-->
-    <artifactId>opencga-storage-hadoop-deps-emr6.1</artifactId>
-    <packaging>jar</packaging>
-
-    <properties>
-        <opencga-storage-hadoop-deps.artifactId>${artifactId}</opencga-storage-hadoop-deps.artifactId>
-
-        <hadoop.version>3.2.1-amzn-1</hadoop.version>
-        <hbase.version>2.2.5</hbase.version>
-
-        <!--Despite using hbase v2.2.5, this EMR version uses the 2.2.1 thirdparty libraries-->
-        <hbase-thirdparty.version>2.2.1</hbase-thirdparty.version>
-
-        <zookeeper.version>3.4.14</zookeeper.version>
-        <phoenix.version>5.0.0-HBase-2.0</phoenix.version>
-        <apache.tephra.version>0.14.0-incubating</apache.tephra.version>
-        <tephra.version>0.7.0</tephra.version>
-        <!--Version changes in hbase2-->
-        <disruptor.version>3.3.6</disruptor.version>
-        <io.dropwizard.metrics-core.version>3.2.1</io.dropwizard.metrics-core.version>
-        <commons-math3.version>3.6.1</commons-math3.version>
-
-        <commons-compress.version>1.18</commons-compress.version>
-        <commons-io.version>2.5</commons-io.version>
-        <commons-net.version>3.6</commons-net.version>
-        <curator.version>2.12.0</curator.version>
-
-        <guava.version>28.0-jre</guava.version>
-    </properties>
-
-    <!-- See:
-       https://stackoverflow.com/questions/30043640/maven-repository-for-emr-hadoop
-       https://docs.aws.amazon.com/en_us/emr/latest/ReleaseGuide/emr-artifact-repository.html
-    -->
-    <repositories>
-        <repository>
-            <id>emr-6.1.0-artifacts</id>
-            <name>EMR 6.1.0 Releases Repository</name>
-            <releases>
-                <enabled>true</enabled>
-            </releases>
-            <snapshots>
-                <enabled>false</enabled>
-            </snapshots>
-            <url>https://s3.eu-west-2.amazonaws.com/eu-west-2-emr-artifacts/emr-6.1.0/repos/maven/</url>
-        </repository>
-    </repositories>
-
-    <!--Tephra changes groupId after version 0.7.1.
-        co.cask.tephra >>> org.apache.tephra
-        To modify the dependency groupId, the old one has to be excluded, and the newer, added.
-
-        Another possible solution could be to include tephra into the shaded uber jar.
-        This will require to add explicitly all the sub-dependencies, and will make the jar bigger.
-
-        Other dependency changes:
-          - commons-math(2) upgrades to commons-math3
-          - commons-configuration(1) upgrades to commons-configuration2
-        -->
-
-    <dependencies>
-
-        <dependency>
-            <groupId>com.google.protobuf</groupId>
-            <artifactId>protobuf-java</artifactId>
-            <version>${protobuf2.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>com.google.guava</groupId>
-            <artifactId>guava</artifactId>
-            <version>${guava.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- =================================================== -->
-        <!-- Dependencies that we WANT. Included in the uber-jar -->
-        <!-- Add <optional>true</optional> to avoid transitivity -->
-        <!-- =================================================== -->
-
-        <!--Hadoop dependencies-->
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-common</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-client</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-hdfs</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-aws</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!--HBase dependencies-->
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-server</artifactId>
-            <version>${hbase.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-mapreduce</artifactId>
-            <version>${hbase.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- Phoenix-core dependencies. Coprocessors uses grpc services-->
-        <dependency>
-            <groupId>org.apache.phoenix</groupId>
-            <artifactId>phoenix-core</artifactId>
-            <version>${phoenix.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- ============================================= -->
-        <!-- Test dependencies                             -->
-        <!-- ============================================= -->
-        <!--Specify Hadoop minicluster version-->
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-minicluster</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-testing-util</artifactId>
-            <version>${hbase.version}</version>
-            <type>test-jar</type>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-it</artifactId>
-            <version>${hbase.version}</version>
-            <type>test-jar</type>
-            <optional>true</optional>
-        </dependency>
-
-
-        <!-- ============================================= -->
-        <!-- TRANSITIVE dependencies. Not to be included   -->
-        <!-- Needed by some dependencies.                  -->
-        <!-- Dependency broken due to optional parent      -->
-        <!-- ============================================= -->
-        <dependency>
-            <groupId>org.apache.htrace</groupId>
-            <artifactId>htrace-core</artifactId>
-            <version>3.1.0-incubating</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-cli</groupId>
-            <artifactId>commons-cli</artifactId>
-            <version>1.2</version>
-        </dependency>
-
-        <!-- Exclude mortbay from avro -->
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro-ipc</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro-mapred</artifactId>
-            <classifier>hadoop2</classifier>
-        </dependency>
-
-        <!--Needed by hadoop-common -->
-<!--        <dependency>-->
-<!--            <groupId>commons-configuration</groupId>-->
-<!--            <artifactId>commons-configuration</artifactId>-->
-<!--        </dependency>-->
-        <dependency>
-            <groupId>commons-lang</groupId>
-            <artifactId>commons-lang</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>commons-logging</groupId>
-            <artifactId>commons-logging</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>commons-io</groupId>
-            <artifactId>commons-io</artifactId>
-            <version>${commons-io.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-net</groupId>
-            <artifactId>commons-net</artifactId>
-            <version>${commons-net.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-httpclient</groupId>
-            <artifactId>commons-httpclient</artifactId>
-            <version>${commons-httpclient.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-recipes</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-client</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-framework</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.zookeeper</groupId>
-            <artifactId>zookeeper</artifactId>
-            <version>${zookeeper.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-hdfs -->
-        <dependency>
-            <groupId>org.fusesource.leveldbjni</groupId>
-            <artifactId>leveldbjni-all</artifactId>
-            <version>${leveldbjni-all.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-auth -->
-        <dependency>
-            <groupId>org.apache.directory.server</groupId>
-            <artifactId>apacheds-kerberos-codec</artifactId>
-            <scope>compile</scope>
-            <version>${apacheds-kerberos-codec.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-azure -->
-        <dependency>
-            <groupId>com.microsoft.azure</groupId>
-            <artifactId>azure-storage</artifactId>
-            <version>2.0.0</version>
-        </dependency>
-        <!-- hadoop-azure uses the class org.mortbay.util.ajax.JSON -->
-        <dependency>
-            <groupId>org.mortbay.jetty</groupId>
-            <artifactId>jetty-util</artifactId>
-            <version>${mortbay.jetty.version}</version>
-        </dependency>
-
-        <!--Needed by hbase-server -->
-        <dependency>
-            <groupId>com.lmax</groupId>
-            <artifactId>disruptor</artifactId>
-            <version>${disruptor.version}</version>
-        </dependency>
-<!--        <dependency>-->
-<!--            <groupId>com.yammer.metrics</groupId>-->
-<!--            <artifactId>metrics-core</artifactId>-->
-<!--            <version>${metrics-core.version}</version>-->
-<!--        </dependency>-->
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-math</artifactId>
-            <version>${commons-math.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-compress</artifactId>
-            <version>${commons-compress.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>io.netty</groupId>
-            <artifactId>netty-all</artifactId>
-            <version>${netty.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.jamon</groupId>
-            <artifactId>jamon-runtime</artifactId>
-            <version>${jamon-runtime.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-core-asl</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-mapper-asl</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-jaxrs</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-xc</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-
-        <!-- Needed by phoenix -->
-        <!-- Make sure we have all the antlr dependencies -->
-        <dependency>
-            <groupId>org.antlr</groupId>
-            <artifactId>antlr-runtime</artifactId>
-            <version>${antlr.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>jline</groupId>
-            <artifactId>jline</artifactId>
-            <version>${jline.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>sqlline</groupId>
-            <artifactId>sqlline</artifactId>
-            <version>${sqlline.version}</version>
-        </dependency>
-<!--        <dependency>-->
-<!--            <groupId>co.cask.tephra</groupId>-->
-<!--            <artifactId>tephra-api</artifactId>-->
-<!--            <version>${tephra.version}</version>-->
-<!--        </dependency>-->
-<!--        <dependency>-->
-<!--            <groupId>co.cask.tephra</groupId>-->
-<!--            <artifactId>tephra-core</artifactId>-->
-<!--            <version>${tephra.version}</version>-->
-<!--        </dependency>-->
-<!--        <dependency>-->
-<!--            <groupId>co.cask.tephra</groupId>-->
-<!--            <artifactId>tephra-hbase-compat-1.1</artifactId>-->
-<!--            <version>${tephra.version}</version>-->
-<!--        </dependency>-->
-        <dependency>
-            <groupId>org.apache.httpcomponents</groupId>
-            <artifactId>httpclient</artifactId>
-            <version>4.0.1</version>
-        </dependency>
-        <dependency>
-            <groupId>org.iq80.snappy</groupId>
-            <artifactId>snappy</artifactId>
-            <version>${snappy.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-codec</groupId>
-            <artifactId>commons-codec</artifactId>
-            <version>${commons-codec.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-collections</groupId>
-            <artifactId>commons-collections</artifactId>
-            <version>${collections.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-csv</artifactId>
-            <version>${commons-csv.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>joda-time</groupId>
-            <artifactId>joda-time</artifactId>
-        </dependency>
-
-        <!--  Hadoop 3 specific dependencies -->
-        <dependency>
-            <groupId>org.apache.hbase.thirdparty</groupId>
-            <artifactId>hbase-shaded-netty</artifactId>
-            <version>${hbase-thirdparty.version}</version>
-            <!--included in uber-jar-->
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.tephra</groupId>
-            <artifactId>tephra-api</artifactId>
-            <version>${apache.tephra.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.tephra</groupId>
-            <artifactId>tephra-core</artifactId>
-            <version>${apache.tephra.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>ch.qos.logback</groupId>
-                    <artifactId>logback-core</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>ch.qos.logback</groupId>
-                    <artifactId>logback-classic</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.tephra</groupId>
-            <artifactId>tephra-hbase-compat-1.1</artifactId>
-            <version>${apache.tephra.version}</version>
-        </dependency>
-
-        <dependency>
-            <!--Replaces commons-configuration:1.x in hadoop 3.x -->
-            <!--Exclude commons-configuration:1.x from opencga-storage-hadoop-deps-->
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-configuration2</artifactId>
-            <version>2.1.1</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.apache.commons</groupId>
-                    <artifactId>commons-lang3</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <dependency>
-            <!--Replaces commons-math:2.x in hbase2-->
-            <!--Exclude commons-math:2.x from opencga-storage-hadoop-deps-->
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-math3</artifactId>
-            <version>${commons-math3.version}</version>
-        </dependency>
-        <dependency>
-            <!--Replaces com.yammer.metrics:metrics-core:2.x in hbase2-->
-            <!--yammer.metrics version still needed for Kafka and Flume (not used) -->
-            <groupId>io.dropwizard.metrics</groupId>
-            <artifactId>metrics-core</artifactId>
-            <version>${io.dropwizard.metrics-core.version}</version>
-        </dependency>
-        <dependency>
-            <!--New in hadoop3-->
-            <!--Old htrace-core:3.x is still needed-->
-            <groupId>org.apache.htrace</groupId>
-            <artifactId>htrace-core4</artifactId>
-            <version>4.1.0-incubating</version>
-        </dependency>
-        <dependency>
-            <!--New in hadoop3 -->
-            <groupId>com.google.re2j</groupId>
-            <artifactId>re2j</artifactId>
-            <version>1.1</version>
-        </dependency>
-        <dependency>
-            <!--New in hbase2-->
-            <groupId>org.apache.hbase.thirdparty</groupId>
-            <artifactId>hbase-shaded-protobuf</artifactId>
-            <version>${hbase-thirdparty.version}</version>
-        </dependency>
-        <dependency>
-            <!--New in hbase2-->
-            <groupId>org.apache.hbase.thirdparty</groupId>
-            <artifactId>hbase-shaded-miscellaneous</artifactId>
-            <version>${hbase-thirdparty.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.yetus</groupId>
-            <artifactId>audience-annotations</artifactId>
-            <version>0.5.0</version>
-        </dependency>
-
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-azure-datalake</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <!--
-              | Dependency needed by ABFS (hadoop-azure-datalake)
-              | Using 1.0.7.Final instead of 1.0.4.Final.
-              | See:
-              |  https://issues.apache.org/jira/browse/HADOOP-16460
-              |  https://issues.apache.org/jira/browse/HADOOP-16410
-              |  https://issues.apache.org/jira/browse/HADOOP-16405
-              -->
-            <groupId>org.wildfly.openssl</groupId>
-            <artifactId>wildfly-openssl</artifactId>
-            <version>1.0.7.Final</version>
-        </dependency>
-    </dependencies>
-
-
-</project>
\ No newline at end of file
diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-hdp2.6/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-hdp2.6/pom.xml
deleted file mode 100644
index 5a162302e74..00000000000
--- a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-hdp2.6/pom.xml
+++ /dev/null
@@ -1,376 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-  ~ Copyright 2015-2019 OpenCB
-  ~
-  ~ Licensed under the Apache License, Version 2.0 (the "License");
-  ~ you may not use this file except in compliance with the License.
-  ~ You may obtain a copy of the License at
-  ~
-  ~     http://www.apache.org/licenses/LICENSE-2.0
-  ~
-  ~ Unless required by applicable law or agreed to in writing, software
-  ~ distributed under the License is distributed on an "AS IS" BASIS,
-  ~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  ~ See the License for the specific language governing permissions and
-  ~ limitations under the License.
-  -->
-<project xmlns="http://maven.apache.org/POM/4.0.0"
-         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-
-    <parent>
-        <groupId>org.opencb.opencga</groupId>
-        <artifactId>opencga-storage-hadoop-deps</artifactId>
-        <version>3.0.0-SNAPSHOT</version>
-        <relativePath>../pom.xml</relativePath>
-    </parent>
-
-    <!--<groupId>org.opencb.opencga</groupId>-->
-    <artifactId>opencga-storage-hadoop-deps-hdp2.6</artifactId>
-    <packaging>jar</packaging>
-
-    <properties>
-        <opencga-storage-hadoop-deps.artifactId>${artifactId}</opencga-storage-hadoop-deps.artifactId>
-<!--        <hdp.dependencies.version>2.6.5.3033-1</hdp.dependencies.version>-->
-        <hdp.dependencies.version>2.6.5.298-4</hdp.dependencies.version>
-
-        <!--        <guava.version>24.1.1-jre</guava.version>-->
-        <hadoop.version>2.7.3.${hdp.dependencies.version}</hadoop.version>
-        <hbase.version>1.1.2.${hdp.dependencies.version}</hbase.version>
-        <phoenix.version>4.7.0.${hdp.dependencies.version}</phoenix.version>
-        <tephra.version>0.7.0</tephra.version>
-    </properties>
-
-    <repositories>
-        <repository>
-            <id>hortonworks-releases</id>
-            <url>https://repo.hortonworks.com/content/repositories/releases/</url>
-        </repository>
-        <repository>
-            <id>hortonworks-public</id>
-            <url>https://repo.hortonworks.com/content/groups/public</url>
-        </repository>
-    </repositories>
-
-    <dependencies>
-
-        <dependency>
-            <groupId>com.google.protobuf</groupId>
-            <artifactId>protobuf-java</artifactId>
-            <version>${protobuf2.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>com.google.guava</groupId>
-            <artifactId>guava</artifactId>
-            <version>${guava.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- =================================================== -->
-        <!-- Dependencies that we WANT. Included in the uber-jar -->
-        <!-- Add <optional>true</optional> to avoid transitivity -->
-        <!-- =================================================== -->
-
-        <!--Hadoop dependencies-->
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-common</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-client</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-azure</artifactId>
-            <version>${hadoop.version}</version>
-<!--            <optional>true</optional>-->
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-azure-datalake</artifactId>
-            <version>${hadoop.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.apache.hadoop</groupId>
-                    <artifactId>hadoop-common</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.commons</groupId>
-                    <artifactId>commons-lang3</artifactId>
-                </exclusion>
-            </exclusions>
-<!--            <optional>true</optional>-->
-        </dependency>
-
-        <!--HBase dependencies-->
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-server</artifactId>
-            <version>${hbase.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- Phoenix-core dependencies. Coprocessors uses grpc services-->
-        <dependency>
-            <groupId>org.apache.phoenix</groupId>
-            <artifactId>phoenix-core</artifactId>
-            <version>${phoenix.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- ============================================= -->
-        <!-- Test dependencies                             -->
-        <!-- ============================================= -->
-        <!--Specify Hadoop minicluster version-->
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-minicluster</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-testing-util</artifactId>
-            <version>${hbase.version}</version>
-            <type>test-jar</type>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-it</artifactId>
-            <version>${hbase.version}</version>
-            <type>test-jar</type>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- ============================================= -->
-        <!-- TRANSITIVE dependencies. Not to be included   -->
-        <!-- Needed by some dependencies.                  -->
-        <!-- Dependency broken due to optional parent      -->
-        <!-- ============================================= -->
-        <dependency>
-            <groupId>org.apache.htrace</groupId>
-            <artifactId>htrace-core</artifactId>
-            <version>3.1.0-incubating</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-cli</groupId>
-            <artifactId>commons-cli</artifactId>
-            <version>1.2</version>
-        </dependency>
-
-        <!-- Exclude mortbay from avro -->
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro-ipc</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro-mapred</artifactId>
-            <classifier>hadoop2</classifier>
-        </dependency>
-
-        <!--Needed by hadoop-common -->
-        <dependency>
-            <groupId>commons-configuration</groupId>
-            <artifactId>commons-configuration</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>commons-lang</groupId>
-            <artifactId>commons-lang</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>commons-logging</groupId>
-            <artifactId>commons-logging</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>commons-io</groupId>
-            <artifactId>commons-io</artifactId>
-            <version>${commons-io.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-net</groupId>
-            <artifactId>commons-net</artifactId>
-            <version>${commons-net.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-httpclient</groupId>
-            <artifactId>commons-httpclient</artifactId>
-            <version>${commons-httpclient.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-recipes</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-client</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-framework</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.zookeeper</groupId>
-            <artifactId>zookeeper</artifactId>
-            <version>${zookeeper.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-hdfs -->
-        <dependency>
-            <groupId>org.fusesource.leveldbjni</groupId>
-            <artifactId>leveldbjni-all</artifactId>
-            <version>${leveldbjni-all.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-auth -->
-        <dependency>
-            <groupId>org.apache.directory.server</groupId>
-            <artifactId>apacheds-kerberos-codec</artifactId>
-            <scope>compile</scope>
-            <version>${apacheds-kerberos-codec.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-azure -->
-        <dependency>
-            <groupId>com.microsoft.azure</groupId>
-            <artifactId>azure-storage</artifactId>
-            <version>2.0.0</version>
-        </dependency>
-        <!-- hadoop-azure uses the class org.mortbay.util.ajax.JSON -->
-        <dependency>
-            <groupId>org.mortbay.jetty</groupId>
-            <artifactId>jetty-util</artifactId>
-            <version>${mortbay.jetty.version}</version>
-        </dependency>
-
-        <!--Needed by hbase-server -->
-        <dependency>
-            <groupId>com.lmax</groupId>
-            <artifactId>disruptor</artifactId>
-            <version>${disruptor.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>com.yammer.metrics</groupId>
-            <artifactId>metrics-core</artifactId>
-            <version>${metrics-core.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-math</artifactId>
-            <version>${commons-math.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-compress</artifactId>
-            <version>${commons-compress.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>io.netty</groupId>
-            <artifactId>netty-all</artifactId>
-            <version>${netty.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.jamon</groupId>
-            <artifactId>jamon-runtime</artifactId>
-            <version>${jamon-runtime.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-core-asl</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-mapper-asl</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-jaxrs</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-xc</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-
-        <!-- Needed by phoenix -->
-        <!-- Make sure we have all the antlr dependencies -->
-        <dependency>
-            <groupId>org.antlr</groupId>
-            <artifactId>antlr-runtime</artifactId>
-            <version>${antlr.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>jline</groupId>
-            <artifactId>jline</artifactId>
-            <version>${jline.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>sqlline</groupId>
-            <artifactId>sqlline</artifactId>
-            <version>${sqlline.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>co.cask.tephra</groupId>
-            <artifactId>tephra-api</artifactId>
-            <version>${tephra.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>co.cask.tephra</groupId>
-            <artifactId>tephra-core</artifactId>
-            <version>${tephra.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>co.cask.tephra</groupId>
-            <artifactId>tephra-hbase-compat-1.1</artifactId>
-            <version>${tephra.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.httpcomponents</groupId>
-            <artifactId>httpclient</artifactId>
-            <version>4.0.1</version>
-        </dependency>
-        <dependency>
-            <groupId>org.iq80.snappy</groupId>
-            <artifactId>snappy</artifactId>
-            <version>${snappy.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-codec</groupId>
-            <artifactId>commons-codec</artifactId>
-            <version>${commons-codec.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-collections</groupId>
-            <artifactId>commons-collections</artifactId>
-            <version>${collections.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-csv</artifactId>
-            <version>${commons-csv.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>joda-time</groupId>
-            <artifactId>joda-time</artifactId>
-        </dependency>
-
-    </dependencies>
-</project>
\ No newline at end of file
diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-hdp3.1/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-hdp3.1/pom.xml
deleted file mode 100644
index ee2c708c193..00000000000
--- a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/opencga-storage-hadoop-deps-hdp3.1/pom.xml
+++ /dev/null
@@ -1,542 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-  ~ Copyright 2015-2019 OpenCB
-  ~
-  ~ Licensed under the Apache License, Version 2.0 (the "License");
-  ~ you may not use this file except in compliance with the License.
-  ~ You may obtain a copy of the License at
-  ~
-  ~     http://www.apache.org/licenses/LICENSE-2.0
-  ~
-  ~ Unless required by applicable law or agreed to in writing, software
-  ~ distributed under the License is distributed on an "AS IS" BASIS,
-  ~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  ~ See the License for the specific language governing permissions and
-  ~ limitations under the License.
-  -->
-<project xmlns="http://maven.apache.org/POM/4.0.0"
-         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-
-    <parent>
-        <groupId>org.opencb.opencga</groupId>
-        <artifactId>opencga-storage-hadoop-deps</artifactId>
-        <version>3.0.0-SNAPSHOT</version>
-        <relativePath>../pom.xml</relativePath>
-    </parent>
-
-    <!--<groupId>org.opencb.opencga</groupId>-->
-    <artifactId>opencga-storage-hadoop-deps-hdp3.1</artifactId>
-    <packaging>jar</packaging>
-
-    <properties>
-        <opencga-storage-hadoop-deps.artifactId>${artifactId}</opencga-storage-hadoop-deps.artifactId>
-        <hdp.dependencies.version>3.1.4.41-5</hdp.dependencies.version>
-
-        <hadoop.version>3.1.1.${hdp.dependencies.version}</hadoop.version>
-        <hbase.version>2.0.2.${hdp.dependencies.version}</hbase.version>
-        <!--Despite using hbase v2.0.0, this HDP version uses the 2.1.0 thirdparty libraries-->
-        <hbase-thirdparty.version>2.1.0</hbase-thirdparty.version>
-        <zookeeper.version>3.4.6</zookeeper.version>
-        <phoenix.version>5.0.0.${hdp.dependencies.version}</phoenix.version>
-        <apache.tephra.version>0.14.0-incubating</apache.tephra.version>
-        <tephra.version>0.7.0</tephra.version>
-        <!--Version changes in hbase2-->
-        <disruptor.version>3.3.6</disruptor.version>
-        <io.dropwizard.metrics-core.version>3.2.1</io.dropwizard.metrics-core.version>
-        <commons-math3.version>3.6.1</commons-math3.version>
-
-        <commons-compress.version>1.18</commons-compress.version>
-        <commons-io.version>2.5</commons-io.version>
-        <commons-net.version>3.6</commons-net.version>
-        <curator.version>2.12.0</curator.version>
-
-        <jetty.version>9.3.24.v20180605</jetty.version>
-
-        <guava.version>28.0-jre</guava.version>
-    </properties>
-    <repositories>
-        <repository>
-            <id>hortonworks-releases</id>
-            <url>https://repo.hortonworks.com/content/repositories/releases/</url>
-        </repository>
-        <repository>
-            <id>hortonworks-public</id>
-            <url>https://repo.hortonworks.com/content/groups/public</url>
-        </repository>
-    </repositories>
-
-    <!--Tephra changes groupId after version 0.7.1.
-        co.cask.tephra >>> org.apache.tephra
-        To modify the dependency groupId, the old one has to be excluded, and the newer, added.
-
-        Another possible solution could be to include tephra into the shaded uber jar.
-        This will require to add explicitly all the sub-dependencies, and will make the jar bigger.
-
-        Other dependency changes:
-          - commons-math(2) upgrades to commons-math3
-          - commons-configuration(1) upgrades to commons-configuration2
-        -->
-
-    <dependencies>
-
-        <dependency>
-            <groupId>com.google.protobuf</groupId>
-            <artifactId>protobuf-java</artifactId>
-            <version>${protobuf2.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>com.google.guava</groupId>
-            <artifactId>guava</artifactId>
-            <version>${guava.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- =================================================== -->
-        <!-- Dependencies that we WANT. Included in the uber-jar -->
-        <!-- Add <optional>true</optional> to avoid transitivity -->
-        <!-- =================================================== -->
-
-        <!--Hadoop dependencies-->
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-common</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-client</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-azure</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!--HBase dependencies-->
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-server</artifactId>
-            <version>${hbase.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- Phoenix-core dependencies. Coprocessors uses grpc services-->
-        <dependency>
-            <groupId>org.apache.phoenix</groupId>
-            <artifactId>phoenix-core</artifactId>
-            <version>${phoenix.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- ============================================= -->
-        <!-- Test dependencies                             -->
-        <!-- ============================================= -->
-        <!--Specify Hadoop minicluster version-->
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-minicluster</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-testing-util</artifactId>
-            <version>${hbase.version}</version>
-            <type>test-jar</type>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-it</artifactId>
-            <version>${hbase.version}</version>
-            <type>test-jar</type>
-            <optional>true</optional>
-        </dependency>
-
-
-        <!-- ============================================= -->
-        <!-- TRANSITIVE dependencies. Not to be included   -->
-        <!-- Needed by some dependencies.                  -->
-        <!-- Dependency broken due to optional parent      -->
-        <!-- ============================================= -->
-        <dependency>
-            <groupId>org.apache.htrace</groupId>
-            <artifactId>htrace-core</artifactId>
-            <version>3.1.0-incubating</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-cli</groupId>
-            <artifactId>commons-cli</artifactId>
-            <version>1.2</version>
-        </dependency>
-
-        <!-- Exclude mortbay from avro -->
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro-ipc</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro-mapred</artifactId>
-            <classifier>hadoop2</classifier>
-        </dependency>
-
-        <!--Needed by hadoop-common -->
-<!--        <dependency>-->
-<!--            <groupId>commons-configuration</groupId>-->
-<!--            <artifactId>commons-configuration</artifactId>-->
-<!--        </dependency>-->
-        <dependency>
-            <groupId>commons-lang</groupId>
-            <artifactId>commons-lang</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>commons-logging</groupId>
-            <artifactId>commons-logging</artifactId>
-        </dependency>
-        <dependency>
-            <groupId>commons-io</groupId>
-            <artifactId>commons-io</artifactId>
-            <version>${commons-io.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-net</groupId>
-            <artifactId>commons-net</artifactId>
-            <version>${commons-net.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-httpclient</groupId>
-            <artifactId>commons-httpclient</artifactId>
-            <version>${commons-httpclient.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-recipes</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-client</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-framework</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.zookeeper</groupId>
-            <artifactId>zookeeper</artifactId>
-            <version>${zookeeper.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.eclipse.jetty</groupId>
-            <artifactId>jetty-server</artifactId>
-            <version>${jetty.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.eclipse.jetty</groupId>
-            <artifactId>jetty-util</artifactId>
-            <version>${jetty.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.eclipse.jetty</groupId>
-            <artifactId>jetty-servlet</artifactId>
-            <version>${jetty.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.eclipse.jetty</groupId>
-            <artifactId>jetty-webapp</artifactId>
-            <version>${jetty.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.eclipse.jetty</groupId>
-            <artifactId>jetty-security</artifactId>
-            <version>${jetty.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.eclipse.jetty</groupId>
-            <artifactId>jetty-http</artifactId>
-            <version>${jetty.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.eclipse.jetty</groupId>
-            <artifactId>jetty-io</artifactId>
-            <version>${jetty.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!--Needed by hadoop-hdfs -->
-        <dependency>
-            <groupId>org.fusesource.leveldbjni</groupId>
-            <artifactId>leveldbjni-all</artifactId>
-            <version>${leveldbjni-all.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-auth -->
-        <dependency>
-            <groupId>org.apache.directory.server</groupId>
-            <artifactId>apacheds-kerberos-codec</artifactId>
-            <scope>compile</scope>
-            <version>${apacheds-kerberos-codec.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-azure -->
-        <dependency>
-            <groupId>com.microsoft.azure</groupId>
-            <artifactId>azure-storage</artifactId>
-            <version>2.0.0</version>
-        </dependency>
-        <!-- hadoop-azure uses the class org.mortbay.util.ajax.JSON -->
-        <dependency>
-            <groupId>org.mortbay.jetty</groupId>
-            <artifactId>jetty-util</artifactId>
-            <version>${mortbay.jetty.version}</version>
-        </dependency>
-
-        <!--Needed by hbase-server -->
-        <dependency>
-            <groupId>com.lmax</groupId>
-            <artifactId>disruptor</artifactId>
-            <version>${disruptor.version}</version>
-        </dependency>
-<!--        <dependency>-->
-<!--            <groupId>com.yammer.metrics</groupId>-->
-<!--            <artifactId>metrics-core</artifactId>-->
-<!--            <version>${metrics-core.version}</version>-->
-<!--        </dependency>-->
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-math</artifactId>
-            <version>${commons-math.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-compress</artifactId>
-            <version>${commons-compress.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>io.netty</groupId>
-            <artifactId>netty-all</artifactId>
-            <version>${netty.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.jamon</groupId>
-            <artifactId>jamon-runtime</artifactId>
-            <version>${jamon-runtime.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-core-asl</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-mapper-asl</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-jaxrs</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-xc</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-
-        <!-- Needed by phoenix -->
-        <!-- Make sure we have all the antlr dependencies -->
-        <dependency>
-            <groupId>org.antlr</groupId>
-            <artifactId>antlr-runtime</artifactId>
-            <version>${antlr.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>jline</groupId>
-            <artifactId>jline</artifactId>
-            <version>${jline.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>sqlline</groupId>
-            <artifactId>sqlline</artifactId>
-            <version>${sqlline.version}</version>
-        </dependency>
-<!--        <dependency>-->
-<!--            <groupId>co.cask.tephra</groupId>-->
-<!--            <artifactId>tephra-api</artifactId>-->
-<!--            <version>${tephra.version}</version>-->
-<!--        </dependency>-->
-<!--        <dependency>-->
-<!--            <groupId>co.cask.tephra</groupId>-->
-<!--            <artifactId>tephra-core</artifactId>-->
-<!--            <version>${tephra.version}</version>-->
-<!--        </dependency>-->
-<!--        <dependency>-->
-<!--            <groupId>co.cask.tephra</groupId>-->
-<!--            <artifactId>tephra-hbase-compat-1.1</artifactId>-->
-<!--            <version>${tephra.version}</version>-->
-<!--        </dependency>-->
-        <dependency>
-            <groupId>org.apache.httpcomponents</groupId>
-            <artifactId>httpclient</artifactId>
-            <version>4.0.1</version>
-        </dependency>
-        <dependency>
-            <groupId>org.iq80.snappy</groupId>
-            <artifactId>snappy</artifactId>
-            <version>${snappy.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-codec</groupId>
-            <artifactId>commons-codec</artifactId>
-            <version>${commons-codec.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-collections</groupId>
-            <artifactId>commons-collections</artifactId>
-            <version>${collections.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-csv</artifactId>
-            <version>${commons-csv.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>joda-time</groupId>
-            <artifactId>joda-time</artifactId>
-        </dependency>
-
-        <!--  Hadoop 3 specific dependencies -->
-        <dependency>
-            <groupId>org.apache.hbase.thirdparty</groupId>
-            <artifactId>hbase-shaded-netty</artifactId>
-            <version>${hbase-thirdparty.version}</version>
-            <!--included in uber-jar-->
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.tephra</groupId>
-            <artifactId>tephra-api</artifactId>
-            <version>${apache.tephra.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.tephra</groupId>
-            <artifactId>tephra-core</artifactId>
-            <version>${apache.tephra.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>ch.qos.logback</groupId>
-                    <artifactId>logback-core</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>ch.qos.logback</groupId>
-                    <artifactId>logback-classic</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.tephra</groupId>
-            <artifactId>tephra-hbase-compat-1.1</artifactId>
-            <version>${apache.tephra.version}</version>
-        </dependency>
-
-        <dependency>
-            <!--Replaces commons-configuration:1.x in hadoop 3.x -->
-            <!--Exclude commons-configuration:1.x from opencga-storage-hadoop-deps-->
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-configuration2</artifactId>
-            <version>2.1.1</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.apache.commons</groupId>
-                    <artifactId>commons-lang3</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <dependency>
-            <!--Replaces commons-math:2.x in hbase2-->
-            <!--Exclude commons-math:2.x from opencga-storage-hadoop-deps-->
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-math3</artifactId>
-            <version>${commons-math3.version}</version>
-        </dependency>
-        <dependency>
-            <!--Replaces com.yammer.metrics:metrics-core:2.x in hbase2-->
-            <!--yammer.metrics version still needed for Kafka and Flume (not used) -->
-            <groupId>io.dropwizard.metrics</groupId>
-            <artifactId>metrics-core</artifactId>
-            <version>${io.dropwizard.metrics-core.version}</version>
-        </dependency>
-        <dependency>
-            <!--New in hadoop3-->
-            <!--Old htrace-core:3.x is still needed-->
-            <groupId>org.apache.htrace</groupId>
-            <artifactId>htrace-core4</artifactId>
-            <version>4.1.0-incubating</version>
-        </dependency>
-        <dependency>
-            <!--New in hadoop3 -->
-            <groupId>com.google.re2j</groupId>
-            <artifactId>re2j</artifactId>
-            <version>1.1</version>
-        </dependency>
-        <dependency>
-            <!--New in hbase2-->
-            <groupId>org.apache.hbase.thirdparty</groupId>
-            <artifactId>hbase-shaded-protobuf</artifactId>
-            <version>${hbase-thirdparty.version}</version>
-        </dependency>
-        <dependency>
-            <!--New in hbase2-->
-            <groupId>org.apache.hbase.thirdparty</groupId>
-            <artifactId>hbase-shaded-miscellaneous</artifactId>
-            <version>${hbase-thirdparty.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.yetus</groupId>
-            <artifactId>audience-annotations</artifactId>
-            <version>0.5.0</version>
-        </dependency>
-
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-azure-datalake</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <!--
-              | Dependency needed by ABFS (hadoop-azure-datalake)
-              | Using 1.0.7.Final instead of 1.0.4.Final.
-              | See:
-              |  https://issues.apache.org/jira/browse/HADOOP-16460
-              |  https://issues.apache.org/jira/browse/HADOOP-16410
-              |  https://issues.apache.org/jira/browse/HADOOP-16405
-              -->
-            <groupId>org.wildfly.openssl</groupId>
-            <artifactId>wildfly-openssl</artifactId>
-            <version>1.0.7.Final</version>
-        </dependency>
-    </dependencies>
-
-
-</project>
\ No newline at end of file
diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/pom.xml
deleted file mode 100644
index 9d9c1350046..00000000000
--- a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/pom.xml
+++ /dev/null
@@ -1,1042 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!--
-  ~ Copyright 2015-2017 OpenCB
-  ~
-  ~ Licensed under the Apache License, Version 2.0 (the "License");
-  ~ you may not use this file except in compliance with the License.
-  ~ You may obtain a copy of the License at
-  ~
-  ~     http://www.apache.org/licenses/LICENSE-2.0
-  ~
-  ~ Unless required by applicable law or agreed to in writing, software
-  ~ distributed under the License is distributed on an "AS IS" BASIS,
-  ~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  ~ See the License for the specific language governing permissions and
-  ~ limitations under the License.
-  -->
-
-<!--
-  ~
-  ~ Dependencies in this pom are divided in these categories:
-  ~  -1 Dependencies we want. Will be included in the uber-jar and marked as "optional" to avoid transitivity
-  ~      * main
-  ~          * hadoop
-  ~          * hbase
-  ~          * phoenix
-  ~      * test
-  ~          * hadoop-minicluster
-  ~          * hbase-testing-util
-  ~  -2 Transitive dependencies of the dependencies that we want
-  ~      * main
-  ~          * ...
-  ~      * test
-  ~          * ...
-  ~  -3 Dependencies we DON'T want (will be shaded)
-  ~      * jersey 1.9
-  ~      * org.mortbay.jetty:servlet-api (only for testing)
-  ~      * proto 2.5.0
-  ~      * guava 11
-  ~
-  ~  Dependencies of the first and second type have to be divided in:
-  ~      * Those that use the dependencies we don't want (to be included in the uber-jar)
-  ~      * Those dependencies that don't use any dependency that we don't want (will be transitive dependencies)
-  ~
-  -->
-<project xmlns="http://maven.apache.org/POM/4.0.0"
-         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-
-    <parent>
-        <groupId>org.opencb.opencga</groupId>
-        <artifactId>opencga-storage-hadoop</artifactId>
-        <version>3.0.0-SNAPSHOT</version>
-        <relativePath>../pom.xml</relativePath>
-    </parent>
-
-    <modules>
-        <module>opencga-storage-hadoop-deps-hdp3.1</module>
-        <module>opencga-storage-hadoop-deps-emr6.1</module>
-        <module>opencga-storage-hadoop-deps-hdp2.6</module>
-<!--        <module>opencga-storage-hadoop-deps-hdp2.5</module>-->
-<!--        <module>opencga-storage-hadoop-deps-emr5.8</module>-->
-<!--        <module>opencga-storage-hadoop-deps-emr5.31</module>-->
-<!--        <module>opencga-storage-hadoop-deps-cdh5.13</module>-->
-    </modules>
-
-    <artifactId>opencga-storage-hadoop-deps</artifactId>
-    <packaging>pom</packaging>
-
-    <properties>
-        <checkstyle.skip>true</checkstyle.skip>
-
-        <!-- Default dependency versions. To be overwritten. -->
-        <hadoop.version>2.7.3</hadoop.version>
-        <hbase.version>1.1.2</hbase.version>
-        <phoenix.version>4.7.0-HBase-1.1</phoenix.version>
-
-        <protobuf2.version>2.5.0</protobuf2.version>
-        <guava.version>15.0</guava.version>
-
-        <!--Read from main hadoop pom.xml . Versions not as a property in that pom-->
-        <commons-httpclient.version>3.1</commons-httpclient.version>
-        <commons-compress.version>1.4.1</commons-compress.version>
-        <commons-io.version>2.5</commons-io.version>
-        <commons-net.version>3.1</commons-net.version>
-        <curator.version>2.7.1</curator.version>
-        <apacheds-kerberos-codec.version>2.0.0-M15</apacheds-kerberos-codec.version>
-        <leveldbjni-all.version>1.8</leveldbjni-all.version>
-        <zookeeper.version>3.4.6</zookeeper.version>
-
-        <!--Read from main hbase pom.xml-->
-        <metrics-core.version>2.2.0</metrics-core.version>
-        <disruptor.version>3.3.0</disruptor.version>
-        <commons-math.version>2.2</commons-math.version>
-        <netty.version>4.0.23.Final</netty.version>
-        <jamon-runtime.version>2.4.1</jamon-runtime.version>
-        <codehaus.jackson.version>1.9.13</codehaus.jackson.version>
-        <mortbay.jetty.version>6.1.26</mortbay.jetty.version>
-
-        <!--Read from main phoenix pom.xml-->
-        <commons-configuration.version>1.6</commons-configuration.version>
-        <!--<commons-io.version>2.1</commons-io.version>-->
-        <commons-lang.version>2.5</commons-lang.version>
-        <commons-logging.version>1.2</commons-logging.version>
-        <commons-csv.version>1.0</commons-csv.version>
-        <commons-codec.version>1.7</commons-codec.version>
-        <collections.version>3.2.1</collections.version>
-        <sqlline.version>1.1.9</sqlline.version>
-        <jline.version>2.11</jline.version>
-        <antlr.version>3.5.2</antlr.version> <!--see [PHOENIX-2465]-->
-        <tephra.version>0.7.0</tephra.version>
-        <snappy.version>0.3</snappy.version>
-
-        <joda.version>1.6</joda.version>
-    </properties>
-
-    <dependencyManagement>
-    <dependencies>
-        <!-- =================================================== -->
-        <!-- Dependencies that we DON't want. To be shaded       -->
-        <!-- =================================================== -->
-
-        <dependency>
-            <groupId>com.google.protobuf</groupId>
-            <artifactId>protobuf-java</artifactId>
-            <version>${protobuf2.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>com.google.guava</groupId>
-            <artifactId>guava</artifactId>
-            <version>${guava.version}</version>
-            <optional>true</optional>
-        </dependency>
-
-        <!-- =================================================== -->
-        <!-- Dependencies that we WANT. Included in the uber-jar -->
-        <!-- Add <optional>true</optional> to avoid transitivity -->
-        <!-- =================================================== -->
-
-        <!--Hadoop dependencies-->
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-common</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-client</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-azure</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.apache.hadoop</groupId>
-                    <artifactId>hadoop-common</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.commons</groupId>
-                    <artifactId>commons-lang3</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-
-        <!--HBase dependencies-->
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-server</artifactId>
-            <version>${hbase.version}</version>
-            <optional>true</optional>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>jetty</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>jetty-util</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>jsp-2.1</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>jsp-api-2.1</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>servlet-api-2.5</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>jetty-sslengine</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>com.sun.jersey</groupId>
-                    <artifactId>jersey-core</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>com.sun.jersey</groupId>
-                    <artifactId>jersey-json</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>com.sun.jersey</groupId>
-                    <artifactId>jersey-server</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.slf4j</groupId>
-                    <artifactId>slf4j-api</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.slf4j</groupId>
-                    <artifactId>slf4j-log4j12</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>com.lmax</groupId>
-                    <artifactId>disruptor</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-
-        <!-- Phoenix-core dependencies. Coprocessors uses grpc services-->
-        <dependency>
-            <groupId>org.apache.phoenix</groupId>
-            <artifactId>phoenix-core</artifactId>
-            <version>${phoenix.version}</version>
-            <optional>true</optional>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.apache.hadoop</groupId>
-                    <artifactId>hadoop-common</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hadoop</groupId>
-                    <artifactId>hadoop-client</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hadoop</groupId>
-                    <artifactId>hadoop-mapreduce-client-core</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hadoop</groupId>
-                    <artifactId>hadoop-annotations</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hadoop</groupId>
-                    <artifactId>hadoop-azure</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hbase</groupId>
-                    <artifactId>hbase-server</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hbase</groupId>
-                    <artifactId>hbase-client</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hbase</groupId>
-                    <artifactId>hbase-compact</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hbase</groupId>
-                    <artifactId>hbase-hadoop-compat</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hbase</groupId>
-                    <artifactId>hbase-common</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hbase</groupId>
-                    <artifactId>hbase-protocol</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.hbase</groupId>
-                    <artifactId>hbase-annotations</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-
-        <!-- ============================================= -->
-        <!-- TRANSITIVE dependencies. Not to be included   -->
-        <!-- Needed by some dependencies.                  -->
-        <!-- Dependency broken due to optional parent      -->
-        <!-- ============================================= -->
-        <dependency>
-            <groupId>org.apache.htrace</groupId>
-            <artifactId>htrace-core</artifactId>
-            <version>3.1.0-incubating</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-cli</groupId>
-            <artifactId>commons-cli</artifactId>
-            <version>1.2</version>
-        </dependency>
-
-        <!-- Exclude mortbay from avro -->
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro</artifactId>
-            <version>${avro.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro-ipc</artifactId>
-            <version>${avro.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>servlet-api</artifactId>
-                </exclusion>
-                <exclusion>
-                    <artifactId>jetty</artifactId>
-                    <groupId>org.mortbay.jetty</groupId>
-                </exclusion>
-                <exclusion>
-                    <artifactId>jetty-util</artifactId>
-                    <groupId>org.mortbay.jetty</groupId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.avro</groupId>
-            <artifactId>avro-mapred</artifactId>
-            <classifier>hadoop2</classifier>
-            <version>${avro.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>servlet-api</artifactId>
-                </exclusion>
-                <exclusion>
-                    <artifactId>jetty</artifactId>
-                    <groupId>org.mortbay.jetty</groupId>
-                </exclusion>
-                <exclusion>
-                    <artifactId>jetty-util</artifactId>
-                    <groupId>org.mortbay.jetty</groupId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-
-        <!--Needed by hadoop-common -->
-        <dependency>
-            <groupId>commons-configuration</groupId>
-            <artifactId>commons-configuration</artifactId>
-            <version>1.6</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-lang</groupId>
-            <artifactId>commons-lang</artifactId>
-            <version>2.6</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-logging</groupId>
-            <artifactId>commons-logging</artifactId>
-            <version>1.1.3</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-io</groupId>
-            <artifactId>commons-io</artifactId>
-            <version>${commons-io.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-net</groupId>
-            <artifactId>commons-net</artifactId>
-            <version>${commons-net.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-httpclient</groupId>
-            <artifactId>commons-httpclient</artifactId>
-            <version>${commons-httpclient.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-recipes</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-client</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.curator</groupId>
-            <artifactId>curator-framework</artifactId>
-            <version>${curator.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.zookeeper</groupId>
-            <artifactId>zookeeper</artifactId>
-            <version>${zookeeper.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>jline</groupId>
-                    <artifactId>jline</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.jboss.netty</groupId>
-                    <artifactId>netty</artifactId>
-                </exclusion>
-                <exclusion>
-                    <!-- otherwise seems to drag in junit 3.8.1 via jline -->
-                    <groupId>junit</groupId>
-                    <artifactId>junit</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>com.sun.jdmk</groupId>
-                    <artifactId>jmxtools</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>com.sun.jmx</groupId>
-                    <artifactId>jmxri</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.slf4j</groupId>
-                    <artifactId>slf4j-log4j12</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>log4j</groupId>
-                    <artifactId>log4j</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-
-        <!--Needed by hadoop-hdfs -->
-        <dependency>
-            <groupId>org.fusesource.leveldbjni</groupId>
-            <artifactId>leveldbjni-all</artifactId>
-            <version>${leveldbjni-all.version}</version>
-        </dependency>
-
-        <!--Needed by hadoop-auth -->
-        <dependency>
-            <groupId>org.apache.directory.server</groupId>
-            <artifactId>apacheds-kerberos-codec</artifactId>
-            <scope>compile</scope>
-            <version>${apacheds-kerberos-codec.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.apache.directory.api</groupId>
-                    <artifactId>api-asn1-ber</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.directory.api</groupId>
-                    <artifactId>api-i18n</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.directory.api</groupId>
-                    <artifactId>api-ldap-model</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>net.sf.ehcache</groupId>
-                    <artifactId>ehcache-core</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-
-        <!--Needed by hadoop-azure -->
-        <dependency>
-            <groupId>com.microsoft.azure</groupId>
-            <artifactId>azure-storage</artifactId>
-            <version>2.0.0</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.apache.hadoop</groupId>
-                    <artifactId>hadoop-common</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.apache.commons</groupId>
-                    <artifactId>commons-lang3</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <!-- hadoop-azure uses the class org.mortbay.util.ajax.JSON -->
-        <dependency>
-            <groupId>org.mortbay.jetty</groupId>
-            <artifactId>jetty-util</artifactId>
-            <version>${mortbay.jetty.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.mortbay.jetty</groupId>
-                    <artifactId>servlet-api</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-
-        <!--Needed by hbase-server -->
-        <dependency>
-            <groupId>com.lmax</groupId>
-            <artifactId>disruptor</artifactId>
-            <version>${disruptor.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>com.yammer.metrics</groupId>
-            <artifactId>metrics-core</artifactId>
-            <version>${metrics-core.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-math</artifactId>
-            <version>${commons-math.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-compress</artifactId>
-            <version>${commons-compress.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>io.netty</groupId>
-            <artifactId>netty-all</artifactId>
-            <version>${netty.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.jamon</groupId>
-            <artifactId>jamon-runtime</artifactId>
-            <version>${jamon-runtime.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-core-asl</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-mapper-asl</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-jaxrs</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.jackson</groupId>
-            <artifactId>jackson-xc</artifactId>
-            <version>${codehaus.jackson.version}</version>
-        </dependency>
-
-        <!-- Needed by phoenix -->
-        <!-- Make sure we have all the antlr dependencies -->
-        <dependency>
-            <groupId>org.antlr</groupId>
-            <artifactId>antlr-runtime</artifactId>
-            <version>${antlr.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>jline</groupId>
-            <artifactId>jline</artifactId>
-            <version>${jline.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>sqlline</groupId>
-            <artifactId>sqlline</artifactId>
-            <version>${sqlline.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>co.cask.tephra</groupId>
-            <artifactId>tephra-api</artifactId>
-            <version>${tephra.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>co.cask.tephra</groupId>
-            <artifactId>tephra-core</artifactId>
-            <version>${tephra.version}</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>ch.qos.logback</groupId>
-                    <artifactId>logback-core</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>ch.qos.logback</groupId>
-                    <artifactId>logback-classic</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <dependency>
-            <groupId>co.cask.tephra</groupId>
-            <artifactId>tephra-hbase-compat-1.1</artifactId>
-            <version>${tephra.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.httpcomponents</groupId>
-            <artifactId>httpclient</artifactId>
-            <version>4.0.1</version>
-        </dependency>
-        <dependency>
-            <groupId>org.iq80.snappy</groupId>
-            <artifactId>snappy</artifactId>
-            <version>${snappy.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-codec</groupId>
-            <artifactId>commons-codec</artifactId>
-            <version>${commons-codec.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-collections</groupId>
-            <artifactId>commons-collections</artifactId>
-            <version>${collections.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-csv</artifactId>
-            <version>${commons-csv.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>joda-time</groupId>
-            <artifactId>joda-time</artifactId>
-            <version>${joda.version}</version>
-        </dependency>
-
-        <!-- ============================================= -->
-        <!-- Test dependencies                             -->
-        <!-- ============================================= -->
-        <!--Specify Hadoop minicluster version-->
-        <dependency>
-            <groupId>org.apache.hadoop</groupId>
-            <artifactId>hadoop-minicluster</artifactId>
-            <version>${hadoop.version}</version>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-testing-util</artifactId>
-            <version>${hbase.version}</version>
-            <type>test-jar</type>
-            <optional>true</optional>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.hbase</groupId>
-            <artifactId>hbase-it</artifactId>
-            <version>${hbase.version}</version>
-            <type>test-jar</type>
-            <optional>true</optional>
-            <exclusions>
-                <exclusion>
-                    <artifactId>hbase-server</artifactId>
-                    <groupId>org.apache.hbase</groupId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <dependency>
-            <!-- Need log4j dependency for running hadoop tests. Internal services use directly the logger. -->
-            <groupId>log4j</groupId>
-            <artifactId>log4j</artifactId>
-            <version>1.2.17</version>
-            <optional>true</optional>
-        </dependency>
-    </dependencies>
-    </dependencyManagement>
-
-    <build>
-        <plugins>
-            <plugin>
-                <groupId>org.apache.maven.plugins</groupId>
-                <artifactId>maven-install-plugin</artifactId>
-                <version>2.5.2</version>
-                <executions>
-                    <execution>
-                        <id>my_install</id>
-                        <goals>
-                            <goal>install</goal>
-                        </goals>
-                        <configuration>
-                            <!--<generatePom>false</generatePom>-->
-                            <!--<pomFile></pomFile>-->
-                        </configuration>
-                    </execution>
-                </executions>
-            </plugin>
-            <plugin>
-                <groupId>org.apache.maven.plugins</groupId>
-                <artifactId>maven-jar-plugin</artifactId>
-                <executions>
-                    <execution>
-                        <id>jar</id>
-                        <goals>
-                            <goal>jar</goal>
-                        </goals>
-                        <configuration>
-                            <skipIfEmpty>true</skipIfEmpty>
-                        </configuration>
-                    </execution>
-                    <execution>
-                        <id>test-jar</id>
-                        <goals>
-                            <goal>test-jar</goal>
-                        </goals>
-                        <configuration>
-                            <classifier>tests</classifier>
-                            <skipIfEmpty>true</skipIfEmpty>
-                        </configuration>
-                    </execution>
-                </executions>
-            </plugin>
-            <plugin>
-                <groupId>org.apache.maven.plugins</groupId>
-                <artifactId>maven-shade-plugin</artifactId>
-                <executions>
-                    <execution>
-                        <id>shade-main-jar</id>
-                        <phase>package</phase>
-                        <goals>
-                            <goal>shade</goal>
-                        </goals>
-                        <configuration>
-                            <shadedClassifierName>shaded</shadedClassifierName>
-                            <createDependencyReducedPom>true</createDependencyReducedPom>
-                            <!--<generateUniqueDependencyReducedPom>true</generateUniqueDependencyReducedPom>-->
-                            <shadedArtifactAttached>true</shadedArtifactAttached>
-                            <createSourcesJar>true</createSourcesJar>
-                            <shadeSourcesContent>true</shadeSourcesContent>
-
-                            <filters>
-                                <filter>
-                                    <artifact>com.sun.jersey:jersey-server</artifact>
-                                    <excludes>
-                                        <exclude>com/sun/jersey/server/impl/provider/RuntimeDelegateImpl*</exclude>
-                                    </excludes>
-                                </filter>
-                                <filter>
-                                    <artifact>com.sun.jersey:jersey-client</artifact>
-                                    <excludes>
-                                        <exclude>com/sun/ws/rs/ext/RuntimeDelegateImpl*</exclude>
-                                    </excludes>
-                                </filter>
-                                <filter>
-                                    <!--Include and relocate only the problematic class. Very isolated problem-->
-                                    <artifact>com.google.guava:guava</artifact>
-                                    <includes>
-                                        <include>com/google/common/io/Closeables*</include>
-                                        <include>com/google/common/base/Stopwatch*</include>
-                                        <include>com/google/common/base/Preconditions*</include>
-                                    </includes>
-                                </filter>
-                                <filter>
-                                    <artifact>org.apache.phoenix:phoenix-core</artifact>
-                                    <excludes>
-                                        <exclude>com/codahale/metrics/*</exclude>
-                                    </excludes>
-                                </filter>
-                            </filters>
-
-                            <!-- This relocation section MUST be exactly the same as the test-->
-                            <relocations>
-                                <!--<relocation>-->
-                                    <!--<pattern>javax.servlet</pattern>-->
-                                    <!--<shadedPattern>shaded.javax.servlet</shadedPattern>-->
-                                <!--</relocation>-->
-                                <relocation>
-                                    <pattern>javax.ws.rs</pattern>
-                                    <shadedPattern>shaded.javax.ws.rs</shadedPattern>
-                                </relocation>
-                                <relocation>
-                                    <pattern>com.google.protobuf</pattern>
-                                    <shadedPattern>shaded.com.google.protobuf</shadedPattern>
-                                </relocation>
-                                <relocation>
-                                    <!--Include and relocate only the problematic class. Very isolated problem-->
-                                    <pattern>com.google.common</pattern>
-                                    <shadedPattern>shaded.com.google.common</shadedPattern>
-                                    <includes>
-                                        <include>com.google.common.io.Closeables</include>
-                                        <include>com.google.common.base.Stopwatch</include>
-                                        <include>com.google.common.base.Preconditions</include>
-                                    </includes>
-                                    <!--<excludes>-->
-                                    <!--<exclude>com.google.common.base.**</exclude>-->
-                                    <!--</excludes>-->
-                                </relocation>
-                                <relocation>
-                                    <pattern>org.eclipse.jetty</pattern>
-                                    <shadedPattern>shaded.org.eclipse.jetty</shadedPattern>
-                                    <includes>
-                                        <include>org.eclipse.jetty.server.**</include>
-                                        <include>org.eclipse.jetty.webapp.**</include>
-                                        <include>org.eclipse.jetty.servlet.**</include>
-                                        <include>org.eclipse.jetty.security.**</include>
-                                        <include>org.eclipse.jetty.http.**</include>
-                                        <include>org.eclipse.jetty.io.**</include>
-                                        <include>org.eclipse.jetty.util.**</include>
-                                    </includes>
-                                </relocation>
-                            </relocations>
-
-                            <artifactSet>
-                                <includes>
-                                    <!-- Include old servlet-api, which is relocated.
-                                        This line won't include new servlet-api.
-                                        Artifact name in 3.x is "javax.servlet-api", and in 2.x "servlet-api" -->
-                                    <!--<include>javax.servlet:servlet-api</include>-->
-                                    <include>javax.ws.rs</include>
-
-                                    <!-- Include jersey1, which is relocated. -->
-                                    <include>com.sun.jersey</include>
-
-                                    <!-- Uses jersey, proto2 and guava. -->
-                                    <include>org.apache.hadoop</include>
-                                    <!-- Uses jersey and hadoop. -->
-                                    <include>org.apache.hbase</include>
-
-                                    <!--Spark uses jersey 2. Should not be included-->
-                                    <!--<include>org.apache.spark</include>-->
-
-                                    <!-- Does not use jersey -->
-                                    <!--<include>org.apache.zookeeper</include>-->
-
-                                    <!-- Not needed. Does not use jersey. Do not include, or include all antlr dependencies. -->
-                                    <!-- Needed. Uses proto2 through hbase interfaces-->
-                                    <include>org.apache.phoenix</include>
-
-                                    <!-- Not needed. -->
-                                    <!--<include>org.apache.htrace</include>-->
-
-                                    <include>com.google.guava</include>
-                                    <include>com.google.protobuf</include>
-
-                                    <!--Netty uses proto2 (see ProtobufDecoder)-->
-                                    <include>org.apache.hbase.thirdparty:hbase-shaded-netty</include>
-
-                                    <include>org.eclipse.jetty:jetty-server</include>
-                                    <include>org.eclipse.jetty:jetty-webapp</include>
-                                    <include>org.eclipse.jetty:jetty-servlet</include>
-                                    <include>org.eclipse.jetty:jetty-security</include>
-                                    <include>org.eclipse.jetty:jetty-http</include>
-                                    <include>org.eclipse.jetty:jetty-io</include>
-                                    <include>org.eclipse.jetty:jetty-util</include>
-                                </includes>
-                                <excludes>
-                                    <!--Exclude all test dependencies.-->
-                                    <exclude>org.apache.hbase:**:tests</exclude>
-                                    <exclude>org.apache.hadoop:hadoop-minicluster</exclude>
-                                    <exclude>org.apache.hadoop:**:tests</exclude>
-                                    <exclude>org.mortbay.jetty:**</exclude>
-                                    <exclude>log4j:**</exclude>
-                                </excludes>
-                            </artifactSet>
-
-                            <!--VERY IMPORTANT!! Merge matching files in META-INF/services -->
-                            <transformers>
-                                <transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer"/>
-                            </transformers>
-
-                        </configuration>
-                    </execution>
-
-                    <execution>
-                        <id>shade-test-jar</id>
-                        <phase>package</phase>
-                        <goals>
-                            <goal>shade</goal>
-                        </goals>
-                        <configuration>
-                            <shadedArtifactAttached>true</shadedArtifactAttached>
-                            <shadedClassifierName>tests</shadedClassifierName>
-                            <createSourcesJar>true</createSourcesJar>
-
-                            <relocations>
-                                <!--<relocation>-->
-                                    <!--<pattern>javax.servlet</pattern>-->
-                                    <!--<shadedPattern>shaded.javax.servlet</shadedPattern>-->
-                                <!--</relocation>-->
-                                <relocation>
-                                    <pattern>javax.ws.rs</pattern>
-                                    <shadedPattern>shaded.javax.ws.rs</shadedPattern>
-                                </relocation>
-                                <relocation>
-                                    <pattern>com.google.protobuf</pattern>
-                                    <shadedPattern>shaded.com.google.protobuf</shadedPattern>
-                                </relocation>
-                                <relocation>
-                                    <!--Include and relocate only the problematic class. Very isolated problem-->
-                                    <pattern>com.google.common</pattern>
-                                    <shadedPattern>shaded.com.google.common</shadedPattern>
-                                    <includes>
-                                        <include>com.google.common.io.Closeables</include>
-                                        <include>com.google.common.base.Stopwatch</include>
-                                    </includes>
-                                </relocation>
-
-                                <relocation>
-                                    <pattern>org.eclipse.jetty</pattern>
-                                    <shadedPattern>shaded.org.eclipse.jetty</shadedPattern>
-                                    <includes>
-                                        <include>org.eclipse.jetty.server.**</include>
-                                        <include>org.eclipse.jetty.webapp.**</include>
-                                        <include>org.eclipse.jetty.servlet.**</include>
-                                        <include>org.eclipse.jetty.security.**</include>
-                                        <include>org.eclipse.jetty.http.**</include>
-                                        <include>org.eclipse.jetty.io.**</include>
-                                        <include>org.eclipse.jetty.util.**</include>
-                                    </includes>
-                                </relocation>
-                            </relocations>
-
-                            <artifactSet>
-                                <!--Include test dependencies that may be affected by the relocation-->
-                                <!--Add mortbay jetty version to run tests-->
-                                <includes>
-                                    <!--<include>org.apache.hbase:hbase-it:tests</include>-->
-                                    <!--<include>org.apache.hbase:hbase-testing-utility:tests</include>-->
-                                    <!--<include>org.apache.hadoop:hadoop-minicluster</include>-->
-                                    <include>org.apache.hbase:**:tests</include>
-                                    <include>org.apache.hadoop:hadoop-minicluster</include>
-                                    <include>org.apache.hadoop:**:tests</include>
-                                    <include>org.mortbay.jetty:servlet-api</include>
-                                    <include>org.mortbay.jetty:jetty</include>
-                                    <include>org.mortbay.jetty:jetty-util</include>
-                                    <include>org.mortbay.jetty:jetty-sslengine</include>
-                                    <exclude>log4j:**</exclude>
-                                </includes>
-                            </artifactSet>
-
-                            <!--VERY IMPORTANT!! Merge matching files in META-INF/services -->
-                            <transformers>
-                                <transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer"/>
-                            </transformers>
-
-                        </configuration>
-                    </execution>
-                </executions>
-            </plugin>
-            <plugin>
-                <groupId>org.apache.maven.plugins</groupId>
-                <artifactId>maven-dependency-plugin</artifactId>
-                <version>3.6.0</version>
-                <executions>
-                    <execution>
-                        <id>analyze</id>
-                        <goals>
-                            <goal>analyze-only</goal>
-                        </goals>
-                        <configuration>
-                            <failOnWarning>false</failOnWarning>
-<!--                            <ignoredUnusedDeclaredDependencies>-->
-<!--                                <ignoredUnusedDeclaredDependency>org.opencb.opencga:opencga-storage-hadoop*-->
-<!--                                </ignoredUnusedDeclaredDependency>-->
-<!--                                <ignoredUnusedDeclaredDependency>javax.servlet:javax.servlet-api:jar:3.1.0-->
-<!--                                </ignoredUnusedDeclaredDependency>-->
-<!--                                <ignoredUnusedDeclaredDependency>org.eclipse.jetty:*-->
-<!--                                </ignoredUnusedDeclaredDependency>-->
-<!--                                <ignoredUnusedDeclaredDependency>jakarta.ws.rs:jakarta.ws.rs-api:jar:2.1.6-->
-<!--                                </ignoredUnusedDeclaredDependency>-->
-<!--                            </ignoredUnusedDeclaredDependencies>-->
-                        </configuration>
-                    </execution>
-                </executions>
-            </plugin>
-        </plugins>
-    </build>
-
-<!--    Nacho (28/11/2020): this configuration has been added to main pom.xml file -->
-<!--    <profiles>-->
-<!--        <profile>-->
-<!--            <id>deploy</id>-->
-<!--            <build>-->
-<!--                <plugins>-->
-<!--                    <plugin>-->
-<!--                        <groupId>org.apache.maven.plugins</groupId>-->
-<!--                        <artifactId>maven-source-plugin</artifactId>-->
-<!--                        <version>3.2.1</version>-->
-<!--                        <executions>-->
-<!--                            <execution>-->
-<!--                                <id>attach-sources</id>-->
-<!--                                <goals>-->
-<!--                                    <goal>jar-no-fork</goal>-->
-<!--                                </goals>-->
-<!--                            </execution>-->
-<!--                        </executions>-->
-<!--                    </plugin>-->
-<!--                    <plugin>-->
-<!--                        <groupId>org.apache.maven.plugins</groupId>-->
-<!--                        <artifactId>maven-javadoc-plugin</artifactId>-->
-<!--                        <version>3.1.1</version>-->
-<!--                        <executions>-->
-<!--                            <execution>-->
-<!--                                <id>attach-javadocs</id>-->
-<!--                                <goals>-->
-<!--                                    <goal>jar</goal>-->
-<!--                                </goals>-->
-<!--                            </execution>-->
-<!--                        </executions>-->
-<!--                        <configuration>-->
-<!--                            <doclint>none</doclint>-->
-<!--                        </configuration>-->
-<!--                    </plugin>-->
-<!--                    <plugin>-->
-<!--                        <groupId>org.apache.maven.plugins</groupId>-->
-<!--                        <artifactId>maven-gpg-plugin</artifactId>-->
-<!--                        <version>1.6</version>-->
-<!--                        <executions>-->
-<!--                            <execution>-->
-<!--                                <id>sign-artifacts</id>-->
-<!--                                <phase>deploy</phase>-->
-<!--                                <goals>-->
-<!--                                    <goal>sign</goal>-->
-<!--                                </goals>-->
-<!--                                <configuration>-->
-<!--                                    &lt;!&ndash; Prevent `gpg` from using pinentry programs &ndash;&gt;-->
-<!--                                    <gpgArguments>-->
-<!--                                        <arg>&#45;&#45;pinentry-mode</arg>-->
-<!--                                        <arg>loopback</arg>-->
-<!--                                    </gpgArguments>-->
-<!--                                </configuration>-->
-<!--                            </execution>-->
-<!--                        </executions>-->
-<!--                    </plugin>-->
-<!--                    <plugin>-->
-<!--                        <groupId>org.sonatype.plugins</groupId>-->
-<!--                        <artifactId>nexus-staging-maven-plugin</artifactId>-->
-<!--                        <version>1.6.8</version>-->
-<!--                        <extensions>true</extensions>-->
-<!--                        <configuration>-->
-<!--                            <serverId>ossrh</serverId>-->
-<!--                            <nexusUrl>https://oss.sonatype.org/</nexusUrl>-->
-<!--                            <autoReleaseAfterClose>true</autoReleaseAfterClose>-->
-<!--                        </configuration>-->
-<!--                    </plugin>-->
-<!--                </plugins>-->
-<!--            </build>-->
-<!--        </profile>-->
-<!--    </profiles>-->
-
-<!--    <distributionManagement>-->
-<!--        <snapshotRepository>-->
-<!--            <id>ossrh</id>-->
-<!--            <url>https://oss.sonatype.org/content/repositories/snapshots</url>-->
-<!--        </snapshotRepository>-->
-<!--        <repository>-->
-<!--            <id>ossrh</id>-->
-<!--            <url>https://oss.sonatype.org/service/local/staging/deploy/maven2/</url>-->
-<!--        </repository>-->
-<!--    </distributionManagement>-->
-
-</project>