diff --git a/opencga-analysis/pom.xml b/opencga-analysis/pom.xml index 3f36b679783..e5388e6b685 100644 --- a/opencga-analysis/pom.xml +++ b/opencga-analysis/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga - 1.4.0-rc2-dev + 1.4.0-rc2 .. diff --git a/opencga-app/pom.xml b/opencga-app/pom.xml index 57c9308b82b..f46442768a9 100644 --- a/opencga-app/pom.xml +++ b/opencga-app/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga - 1.4.0-rc2-dev + 1.4.0-rc2 ../pom.xml diff --git a/opencga-catalog/pom.xml b/opencga-catalog/pom.xml index 9ef8f871235..08e43fe2bc1 100644 --- a/opencga-catalog/pom.xml +++ b/opencga-catalog/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga - 1.4.0-rc2-dev + 1.4.0-rc2 ../pom.xml diff --git a/opencga-client/pom.xml b/opencga-client/pom.xml index e85bee77929..14c9b8fcabf 100644 --- a/opencga-client/pom.xml +++ b/opencga-client/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga - 1.4.0-rc2-dev + 1.4.0-rc2 ../pom.xml diff --git a/opencga-core/pom.xml b/opencga-core/pom.xml index 98894018b48..054ac419935 100644 --- a/opencga-core/pom.xml +++ b/opencga-core/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga - 1.4.0-rc2-dev + 1.4.0-rc2 ../pom.xml diff --git a/opencga-server/pom.xml b/opencga-server/pom.xml index 63153da10e7..f13b8916c06 100644 --- a/opencga-server/pom.xml +++ b/opencga-server/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga - 1.4.0-rc2-dev + 1.4.0-rc2 ../pom.xml diff --git a/opencga-storage/opencga-storage-app/pom.xml b/opencga-storage/opencga-storage-app/pom.xml index 9ba34c02e44..523433d93c1 100644 --- a/opencga-storage/opencga-storage-app/pom.xml +++ b/opencga-storage/opencga-storage-app/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga-storage - 1.4.0-rc2-dev + 1.4.0-rc2 ../pom.xml diff --git a/opencga-storage/opencga-storage-benchmark/pom.xml b/opencga-storage/opencga-storage-benchmark/pom.xml index a2b91d38bf5..504a05d6a76 100644 --- a/opencga-storage/opencga-storage-benchmark/pom.xml +++ b/opencga-storage/opencga-storage-benchmark/pom.xml @@ -21,7 +21,7 @@ opencga-storage org.opencb.opencga - 1.4.0-rc2-dev + 1.4.0-rc2 4.0.0 diff --git a/opencga-storage/opencga-storage-core/pom.xml b/opencga-storage/opencga-storage-core/pom.xml index 16336a70615..96f769cd85a 100644 --- a/opencga-storage/opencga-storage-core/pom.xml +++ b/opencga-storage/opencga-storage-core/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga-storage - 1.4.0-rc2-dev + 1.4.0-rc2 ../pom.xml diff --git a/opencga-storage/opencga-storage-core/src/main/resources/storage-configuration.yml b/opencga-storage/opencga-storage-core/src/main/resources/storage-configuration.yml index 3c026eac7b8..46cfa82b4aa 100644 --- a/opencga-storage/opencga-storage-core/src/main/resources/storage-configuration.yml +++ b/opencga-storage/opencga-storage-core/src/main/resources/storage-configuration.yml @@ -68,7 +68,7 @@ benchmark: delay: 100 connectionType: REST mode: FIXED - rest: "http://localhost:8080/opencga-1.4.0-rc2-dev/webservices/rest/v1/analysis/variant/query" + rest: "http://localhost:8080/opencga-1.4.0-rc2/webservices/rest/v1/analysis/variant/query" database: ## 'local' connection to CellBase MongoDB hosts: - "localhost:27017" diff --git a/opencga-storage/opencga-storage-core/src/test/resources/storage-configuration-test.yml b/opencga-storage/opencga-storage-core/src/test/resources/storage-configuration-test.yml index 721521195e2..185212aa4ae 100644 --- a/opencga-storage/opencga-storage-core/src/test/resources/storage-configuration-test.yml +++ b/opencga-storage/opencga-storage-core/src/test/resources/storage-configuration-test.yml @@ -35,7 +35,7 @@ benchmark: delay: 100 connectionType: REST mode: FIXED - rest: "http://localhost:8080/opencga-1.4.0-rc2-dev/webservices/rest/v1/analysis/variant/query" + rest: "http://localhost:8080/opencga-1.4.0-rc2/webservices/rest/v1/analysis/variant/query" database: ## 'local' connection to CellBase MongoDB hosts: - "localhost:27017" diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/pom.xml index c26f8a2dde5..2ef5e0d8be9 100644 --- a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/pom.xml +++ b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga-storage-hadoop - 1.4.0-rc2-dev + 1.4.0-rc2 ../pom.xml diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/main/java/org/opencb/opencga/storage/hadoop/variant/io/VariantExporterDriver.java b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/main/java/org/opencb/opencga/storage/hadoop/variant/io/VariantExporterDriver.java index cd61d465b42..0a2f24e55ac 100644 --- a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/main/java/org/opencb/opencga/storage/hadoop/variant/io/VariantExporterDriver.java +++ b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/src/main/java/org/opencb/opencga/storage/hadoop/variant/io/VariantExporterDriver.java @@ -49,7 +49,7 @@ * hbase_conf=$(hbase classpath | tr ":" "\n" | grep "/conf" | tr "\n" ":") * export HADOOP_CLASSPATH=${hbase_conf}:$PWD/libs/avro-1.7.7.jar:$PWD/libs/jackson-databind-2.6.6.jar:$PWD/libs/jackson-core-2.6.6.jar * export HADOOP_CLASSPATH=${HADOOP_CLASSPATH}:$PWD/libs/jackson-annotations-2.6.6.jar - * yarn jar opencga-storage-hadoop-core-1.4.0-rc2-dev-jar-with-dependencies.jar \ + * yarn jar opencga-storage-hadoop-core-1.4.0-rc2-jar-with-dependencies.jar \ * org.opencb.opencga.storage.hadoop.variant.io.VariantExporterDriver \ * opencga_variants study myStudy --of avro --output my.variants.avro --region 22 * diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/pom.xml index a15c3e728db..1dc3343f1fb 100644 --- a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/pom.xml +++ b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-deps/pom.xml @@ -50,13 +50,13 @@ org.opencb.opencga opencga-storage-hadoop - 1.4.0-rc2-dev + 1.4.0-rc2 opencga-storage-hadoop-deps - 1.4.0-rc2-dev + 1.4.0-rc2 opencga-storage - 1.4.0-rc2-dev + 1.4.0-rc2 pom diff --git a/opencga-test/fitnesse/FitNesseRoot/OpenCga/TestsSuits/MetaTests/MetaTests/content.txt b/opencga-test/fitnesse/FitNesseRoot/OpenCga/TestsSuits/MetaTests/MetaTests/content.txt index a35f6e8fa4a..fbc3411e04b 100644 --- a/opencga-test/fitnesse/FitNesseRoot/OpenCga/TestsSuits/MetaTests/MetaTests/content.txt +++ b/opencga-test/fitnesse/FitNesseRoot/OpenCga/TestsSuits/MetaTests/MetaTests/content.txt @@ -4,7 +4,7 @@ !|Table: Rest Fixture | $baseURL | | GET | /v1/meta/about |200| Content-Type: application/json || -|let||js|response.jsonbody.response[0].result[0].Version|1.4.0-rc2-dev| +|let||js|response.jsonbody.response[0].result[0].Version|1.4.0-rc2| !3 OpenCGA Status !|Table: Rest Fixture | $baseURL | diff --git a/opencga-test/fitnesse/FitNesseRoot/OpenCga/TestsSuits/SuiteSetUp/content.txt b/opencga-test/fitnesse/FitNesseRoot/OpenCga/TestsSuits/SuiteSetUp/content.txt index 1ee75c35e04..312755e9af5 100644 --- a/opencga-test/fitnesse/FitNesseRoot/OpenCga/TestsSuits/SuiteSetUp/content.txt +++ b/opencga-test/fitnesse/FitNesseRoot/OpenCga/TestsSuits/SuiteSetUp/content.txt @@ -1,6 +1,6 @@ !define TEST_SYSTEM {slim} !path target/appassembler/dependencies/*.jar -!define OPENCGA_VERSION {opencga-1.4.0-rc2-dev} +!define OPENCGA_VERSION {opencga-1.4.0-rc2} !define TEST_HOST {qa.opencb.org} !define VERSION {v1} diff --git a/opencga-test/pom.xml b/opencga-test/pom.xml index 570a4ecd80a..ca58a5f5dbc 100644 --- a/opencga-test/pom.xml +++ b/opencga-test/pom.xml @@ -24,7 +24,7 @@ org.opencb.opencga opencga-test - 1.4.0-rc2-dev + 1.4.0-rc2 pom diff --git a/pom.xml b/pom.xml index 2cdb3d935ea..3dfa09fb08f 100644 --- a/pom.xml +++ b/pom.xml @@ -22,7 +22,7 @@ org.opencb.opencga opencga - 1.4.0-rc2-dev + 1.4.0-rc2 pom OpenCGA @@ -37,7 +37,7 @@ - 1.4.0-rc2-dev + 1.4.0-rc2 1.8 3.7.2 1.4.2