diff --git a/numalogic/backtest/_prom.py b/numalogic/backtest/_prom.py index 9fc044c7..919d19e7 100644 --- a/numalogic/backtest/_prom.py +++ b/numalogic/backtest/_prom.py @@ -30,7 +30,9 @@ PreprocessFactory, PostprocessFactory, ThresholdFactory, + AggregatorConf, ) +from numalogic.config._config import AggMethod from numalogic.connectors import ConnectorType from numalogic.connectors.prometheus import PrometheusFetcher from numalogic.tools.data import StreamingDataset, inverse_window @@ -238,6 +240,8 @@ def generate_scores( x_recon = np.zeros((len(ds), self.seq_len, n_feat), dtype=np.float32) raw_scores = np.zeros((len(ds), self.seq_len, n_feat), dtype=np.float32) + unified_raw_scores = np.zeros((len(ds), 1), dtype=np.float32) + feature_scores = np.zeros((len(ds), n_feat), dtype=np.float32) unified_scores = np.zeros((len(ds), 1), dtype=np.float32) @@ -253,12 +257,17 @@ def generate_scores( winscores = postproc_udf.compute_feature_scores( raw_scores[idx], self.nlconf.score.window_agg + ) # (nfeat,) + + unified_raw_scores[idx] = postproc_udf.compute_unified_score( + winscores, + AggregatorConf(method=AggMethod.MEAN), ) feature_scores[idx] = postproc_udf.compute_postprocess(postproc_func, winscores) - unified_scores[idx] = postproc_udf.compute_unified_score( - feature_scores[idx], self.nlconf.score.feature_agg + unified_scores[idx] = postproc_udf.compute_postprocess( + postproc_func, unified_raw_scores[idx] ) x_recon = self.window_inverse(x_recon) diff --git a/numalogic/config/factory.py b/numalogic/config/factory.py index a0105329..be2e0777 100644 --- a/numalogic/config/factory.py +++ b/numalogic/config/factory.py @@ -51,6 +51,7 @@ class PreprocessFactory(_ObjectFactory): GaussianNoiseAdder, DifferenceTransform, FlattenVector, + PercentileScaler, ) _CLS_MAP: ClassVar[dict] = { @@ -65,6 +66,7 @@ class PreprocessFactory(_ObjectFactory): "GaussianNoiseAdder": GaussianNoiseAdder, "DifferenceTransform": DifferenceTransform, "FlattenVector": FlattenVector, + "PercentileScaler": PercentileScaler, } def get_pipeline_instance(self, objs_info: list[ModelInfo]): diff --git a/numalogic/transforms/__init__.py b/numalogic/transforms/__init__.py index 55186b83..38d2e11f 100644 --- a/numalogic/transforms/__init__.py +++ b/numalogic/transforms/__init__.py @@ -14,7 +14,7 @@ feature engineering and postprocessing. """ -from numalogic.transforms._scaler import TanhScaler +from numalogic.transforms._scaler import TanhScaler, PercentileScaler from numalogic.transforms._stateless import ( LogTransformer, StaticPowerTransformer, @@ -38,4 +38,5 @@ "GaussianNoiseAdder", "DifferenceTransform", "FlattenVector", + "PercentileScaler", ] diff --git a/numalogic/transforms/_scaler.py b/numalogic/transforms/_scaler.py index 39c59031..4cb7ed2d 100644 --- a/numalogic/transforms/_scaler.py +++ b/numalogic/transforms/_scaler.py @@ -11,12 +11,15 @@ import logging +from typing import Optional import numpy as np import numpy.typing as npt +from sklearn.preprocessing import MinMaxScaler from typing_extensions import Self from numalogic.base import BaseTransformer +from numalogic.transforms._stateless import DataClipper LOGGER = logging.getLogger(__name__) @@ -69,3 +72,39 @@ def fit_transform(self, x: npt.NDArray[float], y=None, **_) -> npt.NDArray[float def _check_if_constant(self, x: npt.NDArray[float]) -> None: delta = np.max(x, axis=0) - np.min(x, axis=0) self._std[delta < self._eps] = 1.0 + + +class PercentileScaler(BaseTransformer): + """ + Scales the data based on the percentiles of the data. + + Args: + ----- + max_percentile: float, optional + The upper percentile to clip the data. + Default is 90. + min_percentile: float, optional + The lower percentile to clip the data. + If None, minimum value of the data is used. + Default is None. + """ + + def __init__(self, max_percentile: float = 95, min_percentile: Optional[float] = None): + self._max_px = max_percentile + self._min_px = min_percentile + self.tx = MinMaxScaler() + + def fit(self, x: npt.NDArray[float]) -> Self: + data_max_px = np.percentile(x, self._max_px, axis=0) + if self._min_px is None: + data_min_px = np.min(x, axis=0) + else: + data_min_px = np.percentile(x, self._min_px, axis=0) + x_clipped = DataClipper(lower=data_min_px, upper=data_max_px).transform(x) + return self.tx.fit(x_clipped) + + def fit_transform(self, x: npt.NDArray[float], y=None, **_): + return self.fit(x).transform(x) + + def transform(self, x: npt.NDArray[float]) -> npt.NDArray[float]: + return self.tx.transform(x) diff --git a/numalogic/udfs/postprocess.py b/numalogic/udfs/postprocess.py index 36af8195..d9a6aa5c 100644 --- a/numalogic/udfs/postprocess.py +++ b/numalogic/udfs/postprocess.py @@ -139,19 +139,14 @@ def exec(self, keys: list[str], datum: Datum) -> Messages: # Postprocess payload try: - # Compute anomaly scores per feature - a_features = self.compute( + # Compute anomaly scores + a_unified, a_features = self.compute( model=thresh_artifact.artifact, input_=payload.get_data(), score_conf=_conf.numalogic_conf.score, postproc_tx=postproc_tx, ) # (nfeat,) - # Compute unified score - a_unified = self.compute_unified_score( - a_features, feat_agg_conf=_conf.numalogic_conf.score.feature_agg - ) - # Calculate adjusted unified score a_adjusted, y_unified, y_features = self._adjust_score(_conf, a_unified, payload) @@ -302,7 +297,7 @@ def compute( postproc_tx=None, score_conf: Optional[ScoreConf] = None, **_, - ) -> NDArray[float]: + ) -> tuple[float, NDArray[float]]: """ Compute thresholding, window aggregation followed by postprocess. @@ -315,7 +310,7 @@ def compute( Returns ------- - Output data of shape (n_features, ) + Tuple of combined/unified score (float), and feature scores of shape (n_features,) Raises ------ @@ -325,13 +320,23 @@ def compute( _struct_log.warning("Score config not provided, using default values") score_conf = ScoreConf() - scores = cls.compute_threshold(model, input_) # (seqlen x nfeat) - win_scores = cls.compute_feature_scores( - scores, win_agg_conf=score_conf.window_agg + thresh_scores = cls.compute_threshold(model, input_) # (seqlen x nfeat) + + # Aggregate over the sequence length + raw_scores = cls.compute_feature_scores( + thresh_scores, win_agg_conf=score_conf.window_agg ) # (nfeat,) + + # Aggregate over the features + unified_raw_score = cls.compute_unified_score(raw_scores, score_conf.feature_agg) # float + if postproc_tx: - win_scores = cls.compute_postprocess(postproc_tx, win_scores) # (nfeat,) - return win_scores # (nfeat, ) + # Postprocess the raw scores + feature_scores = cls.compute_postprocess(postproc_tx, raw_scores) # (nfeat,) + unified_score = cls.compute_postprocess(postproc_tx, unified_raw_score) # float + return unified_score, feature_scores + + return unified_raw_score, raw_scores @classmethod def compute_threshold(cls, model: artifact_t, input_: NDArray[float]) -> NDArray[float]: diff --git a/poetry.lock b/poetry.lock index 96046ef9..9addda54 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,89 +1,88 @@ # This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand. - [[package]] name = "aiohttp" -version = "3.9.3" +version = "3.9.5" description = "Async http client/server framework (asyncio)" optional = false python-versions = ">=3.8" files = [ - {file = "aiohttp-3.9.3-cp310-cp310-macosx_10_9_universal2.whl", hash 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+33,12 @@ cachetools = "^5.3.0" orjson = "^3.9" pynumaflow = "~0.6" prometheus_client = "^0.18.0" +structlog = "^24.1.0" # extras mlflow-skinny = { version = "^2.0", optional = true } redis = { extras = ["hiredis"], version = "^5.0", optional = true } boto3 = { version = "^1.24.64", optional = true } - -structlog = "^24.1.0" - pydruid = { version = "^0.6", optional = true } PyMySQL = { version = "^1.1.0", optional = true } diff --git a/tests/udfs/test_postprocess.py b/tests/udfs/test_postprocess.py index 4101eece..e6979f12 100644 --- a/tests/udfs/test_postprocess.py +++ b/tests/udfs/test_postprocess.py @@ -173,5 +173,6 @@ def test_postprocess_runtime_err_02(udf, mocker, bad_artifact): def test_compute(udf, artifact): - x_inferred = udf.compute(artifact.artifact, np.asarray(DATA["data"])) + y_unified, x_inferred = udf.compute(artifact.artifact, np.asarray(DATA["data"])) + assert isinstance(y_unified, float) assert x_inferred.shape == (2,)