diff --git a/CHANGELOG.md b/CHANGELOG.md
index fe18aecee..07cc4de8d 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,14 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
+## dev
+
+### Credits
+
+### Enhancements & fixes
+
+- [PR #1418](https://github.com/nf-core/rnaseq/pull/1418) - Bump versions back to 3.17.0 after release
+
## [[3.16.1](https://github.com/nf-core/rnaseq/releases/tag/3.16.1)] - 2024-10-16
### Credits
diff --git a/nextflow.config b/nextflow.config
index 496a9429f..84ef3cabf 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -327,7 +327,7 @@ manifest {
description = """RNA sequencing analysis pipeline for gene/isoform quantification and extensive quality control."""
mainScript = 'main.nf'
nextflowVersion = '!>=24.04.2'
- version = '3.16.1'
+ version = '3.17.0dev'
doi = 'https://doi.org/10.5281/zenodo.1400710'
}
diff --git a/tests/default.nf.test.snap b/tests/default.nf.test.snap
index c9981b3d1..ea663624c 100644
--- a/tests/default.nf.test.snap
+++ b/tests/default.nf.test.snap
@@ -43,7 +43,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -227,7 +227,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/featurecounts_group_type.nf.test.snap b/tests/featurecounts_group_type.nf.test.snap
index b14b204a7..9630b4c5d 100644
--- a/tests/featurecounts_group_type.nf.test.snap
+++ b/tests/featurecounts_group_type.nf.test.snap
@@ -43,7 +43,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -221,7 +221,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/hisat2.nf.test.snap b/tests/hisat2.nf.test.snap
index dd6b9d23e..f6fe94c7e 100644
--- a/tests/hisat2.nf.test.snap
+++ b/tests/hisat2.nf.test.snap
@@ -44,7 +44,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -224,7 +224,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/kallisto.nf.test.snap b/tests/kallisto.nf.test.snap
index 4cc4ac925..215a901a4 100644
--- a/tests/kallisto.nf.test.snap
+++ b/tests/kallisto.nf.test.snap
@@ -56,7 +56,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -294,7 +294,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/min_mapped_reads.nf.test.snap b/tests/min_mapped_reads.nf.test.snap
index 2799bc339..a494f6029 100644
--- a/tests/min_mapped_reads.nf.test.snap
+++ b/tests/min_mapped_reads.nf.test.snap
@@ -134,7 +134,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -1221,7 +1221,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/remove_ribo_rna.nf.test.snap b/tests/remove_ribo_rna.nf.test.snap
index 4b477e6a7..f10e886fe 100644
--- a/tests/remove_ribo_rna.nf.test.snap
+++ b/tests/remove_ribo_rna.nf.test.snap
@@ -140,7 +140,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -1435,7 +1435,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/salmon.nf.test.snap b/tests/salmon.nf.test.snap
index 0293e72fa..451c2918f 100644
--- a/tests/salmon.nf.test.snap
+++ b/tests/salmon.nf.test.snap
@@ -50,7 +50,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -367,7 +367,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/skip_qc.nf.test.snap b/tests/skip_qc.nf.test.snap
index 70b17efcb..476f26117 100644
--- a/tests/skip_qc.nf.test.snap
+++ b/tests/skip_qc.nf.test.snap
@@ -40,7 +40,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -169,7 +169,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/skip_trimming.nf.test.snap b/tests/skip_trimming.nf.test.snap
index bfc0873a4..82acf3cfd 100644
--- a/tests/skip_trimming.nf.test.snap
+++ b/tests/skip_trimming.nf.test.snap
@@ -130,7 +130,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/tests/star_rsem.nf.test.snap b/tests/star_rsem.nf.test.snap
index d46ed0819..9d17e1f2d 100644
--- a/tests/star_rsem.nf.test.snap
+++ b/tests/star_rsem.nf.test.snap
@@ -134,7 +134,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
@@ -1314,7 +1314,7 @@
"untar": 1.34
},
"Workflow": {
- "nf-core/rnaseq": "v3.16.1"
+ "nf-core/rnaseq": "v3.17.0dev"
}
},
[
diff --git a/workflows/rnaseq/assets/multiqc/multiqc_config.yml b/workflows/rnaseq/assets/multiqc/multiqc_config.yml
index 260cc8c1d..9b8ee731a 100644
--- a/workflows/rnaseq/assets/multiqc/multiqc_config.yml
+++ b/workflows/rnaseq/assets/multiqc/multiqc_config.yml
@@ -1,5 +1,5 @@
report_comment: >
- This report has been generated by the nf-core/rnaseq analysis pipeline. For information about how to interpret these results, please see the documentation.
+ This report has been generated by the nf-core/rnaseq analysis pipeline. For information about how to interpret these results, please see the documentation.
report_section_order:
# Important checks and failures
sample-status: