Release 1.0.0

[charles-plessy]

Hello,

this is the first release of the pairgenomealign pipeline!

PR checklist

• This comment contains a description of changes (with reason).
• If you've fixed a bug or added code that should be tested, add tests!
• If you've added a new tool - have you followed the pipeline conventions in the contribution docs
• If necessary, also make a PR on the nf-core/pairgenomealign branch on the nf-core/test-datasets repository.
• Make sure your code lints (nf-core lint).
• Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
• Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
• Usage Documentation in docs/usage.md is updated.
• Output Documentation in docs/output.md is updated.
• CHANGELOG.md is updated.
• README.md is updated (including new tool citations and authors/contributors).

[charles-plessy]

I have a couple of documentation and credit updates that I would like to make, and potential improvements to the MultiQC output. Shall I wait first for the 1.0.0 release, or can I bring the changes in via PR without invalidating the first approval ?

[mashehu]

bring them in and ping me, so I can give you a quick second one 😉

[charles-plessy]

Hi @mashehu I have pushed three commits related to MultiQC, acknowledgements and documentation. On our side we are now ready for 1.0.0 release! (And I will be absent the next two weeks by the way).

[charles-plessy]

Hello everybody, I will be back from holidays next week. Please let me know what I can do to complete the release of the pipeline.

[mashehu]

You can ask for a review on slack in the #request-review channel

[christopher-mohr]

Just one comment to check.

[christopher-mohr]

I think someone with admin rights would also need to remove the old required check Run pipeline with test data.

[christopher-mohr]

LGTM!

[charles-plessy]

Thanks! Can I press the Merge button?

[mashehu]