diff --git a/subworkflows/local/neo_prediction.nf b/subworkflows/local/neo_prediction/main.nf similarity index 96% rename from subworkflows/local/neo_prediction.nf rename to subworkflows/local/neo_prediction/main.nf index bd3ff59a..ae18dae2 100644 --- a/subworkflows/local/neo_prediction.nf +++ b/subworkflows/local/neo_prediction/main.nf @@ -5,9 +5,9 @@ import Constants import Utils -include { ANNOTATE_FUSIONS } from '../../modules/local/neo/annotate_fusions/main' -include { NEO_FINDER } from '../../modules/local/neo/finder/main' -include { NEO_SCORER } from '../../modules/local/neo/scorer/main' +include { ANNOTATE_FUSIONS } from '../../../modules/local/neo/annotate_fusions/main' +include { NEO_FINDER } from '../../../modules/local/neo/finder/main' +include { NEO_SCORER } from '../../../modules/local/neo/scorer/main' workflow NEO_PREDICTION{ take: