diff --git a/modules/local/fastp/main.nf b/modules/local/fastp/main.nf index e12cf1c2..0690204c 100644 --- a/modules/local/fastp/main.nf +++ b/modules/local/fastp/main.nf @@ -31,6 +31,7 @@ process FASTP { --disable_adapter_trimming \\ --disable_trim_poly_g \\ --split_by_lines ${4 * max_fastq_records} \\ + --thread ${task.cpus} \\ --out1 ${meta.sample_id}_${meta.library_id}_${meta.lane}_R1.fastp.fastq.gz \\ --out2 ${meta.sample_id}_${meta.library_id}_${meta.lane}_R2.fastp.fastq.gz