From 2717eef41e37d60ef71bb60d2bd3b18055adb00f Mon Sep 17 00:00:00 2001 From: Kobe Lavaerts Date: Tue, 5 Nov 2024 15:27:47 +0000 Subject: [PATCH] update test to use new test files --- tests/test_metadata/main.nf.test | 8 +++++--- 1 file changed, 5 insertions(+), 3 deletions(-) diff --git a/tests/test_metadata/main.nf.test b/tests/test_metadata/main.nf.test index ff5eadd..7d8b122 100644 --- a/tests/test_metadata/main.nf.test +++ b/tests/test_metadata/main.nf.test @@ -11,7 +11,7 @@ nextflow_process { process { """ input[0] = Channel.of( - file("${baseDir}/tests/mindagap.mouse_heart.wga.tiff", checkIfExists:true), + file("${baseDir}/tests/nuclear_image.tif", checkIfExists:true), ) """ } @@ -28,14 +28,16 @@ nextflow_process { process { """ input[0] = Channel.of( - file("${baseDir}/tests/mindagap.mouse_heart.wga.tiff", checkIfExists:true), + file("${baseDir}/tests/nuclear_image.tif", checkIfExists:true), ) """ } } then { def tiff = path(process.out.tiff[0]).tiff - def reference = path("${baseDir}/tests/mindagap.mouse_heart.wga.tiff").tiff + // def reference = path("${baseDir}/tests/mindagap.mouse_heart.wga.tiff").tiff + def reference = path("${baseDir}/tests/nuclear_image.tif").tiff + // def reference = path("${baseDir}/tests/nuclear_image_modified.tif").tiff assert tiff.meta == reference.meta assert tiff.bitmaps == reference.bitmaps }