diff --git a/conf/pipeline/rnaseq/eddie.config b/conf/pipeline/rnaseq/eddie.config index 3c8601ee8..435ec6dbd 100644 --- a/conf/pipeline/rnaseq/eddie.config +++ b/conf/pipeline/rnaseq/eddie.config @@ -3,4 +3,8 @@ process { withName: 'PICARD_MARKDUPLICATES|QUALIMAP_RNASEQ|FASTQC|BBMAP_BBSPLIT' { clusterOptions = { "-l h_vmem=${(task.memory + 4.GB).bytes / task.cpus}" } } + withName: "NFCORE_RNASEQ:RNASEQ:FASTQ_QC_TRIM_FILTER_SETSTRANDEDNESS:FASTQ_FASTQC_UMITOOLS_TRIMGALORE:FASTQC"{ + cpus=5 + memory=24.GB + } }