Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Problems to run nextflow command for fungus taxonomy #734

Closed
Juan-Andres-cmd opened this issue Aug 15, 2024 · 1 comment
Closed

Problems to run nextflow command for fungus taxonomy #734

Juan-Andres-cmd opened this issue Aug 15, 2024 · 1 comment

Comments

@Juan-Andres-cmd
Copy link

when I run my command it appears:

Can't stage file https://files.plutof.ut.ee/public/orig/1E/25/1E25CA4CC30A31C2E2B8CB2C89824C83D080A7F5A62E6263A0E95B37C6628067.tgz -- reason: Unable to access path: https://files.plutof.ut.ee/public/orig/1E/25/1E25CA4CC30A31C2E2B8CB2C89824C83D080A7F5A62E6263A0E95B37C6628067.tgz

I am running the following command: nextflow run nf-core/ampliseq -r 2.10.0 -profile docker --input "sample_sheet.tsv" --FW_primer GGAAGTAAAAGTCGTAACAAGG --RV_primer GCTGCGTTCTTCATCGATGC --illumina_pe_its --min_frequency 2 --dada_ref_taxonomy "unite-fungi" --max_memory '60.GB' --outdir "fungi_out"
@jfy133
Copy link
Member

jfy133 commented Aug 15, 2024 •
edited
Loading

hI @Juan-Andres-cmd please ask on https://github.com/nf-core/ampliseq, as your question does not appear to be related to nf-core/configs

@jfy133 jfy133 closed this as completed Aug 15, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@jfy133 @Juan-Andres-cmd