From e3de5fe587bf6dd11d019106b367d95e66e5c428 Mon Sep 17 00:00:00 2001
From: Jennifer Vendetti <vendetti@stanford.edu>
Date: Wed, 17 Apr 2024 17:51:54 -0700
Subject: [PATCH 1/2] Create ERB template for OBO Foundry notification

---
 views/emails/obofoundry_sync.erb | 17 +++++++++++++++++
 1 file changed, 17 insertions(+)
 create mode 100644 views/emails/obofoundry_sync.erb

diff --git a/views/emails/obofoundry_sync.erb b/views/emails/obofoundry_sync.erb
new file mode 100644
index 00000000..f445b646
--- /dev/null
+++ b/views/emails/obofoundry_sync.erb
@@ -0,0 +1,17 @@
+<% if missing_onts.present? %>
+  <strong>The following OBO Foundry ontologies are missing from <%= ui_name %>:</strong><br /><br />
+  <% missing_onts.each do |ont| %>
+    <a href="<%= ont['homepage'] %>"><%= ont['id'] %></a> (<%= ont['title'] %>)<br /><br />
+  <% end %>
+<% end %>
+
+<% if obsolete_onts.present? %>
+  <strong>The following OBO Foundry ontologies have been deprecated:</strong><br /><br />
+  <% obsolete_onts.each do |ont| %>
+    <a href="<%= ont['homepage'] %>"><%= ont['id'] %></a> (<%= ont['title'] %>)<br /><br />
+  <% end %>
+<% end %>
+
+<% if missing_onts.blank? && obsolete_onts.blank? %>
+  <%= ui_name %> and the OBO Foundry are in sync.
+<% end %>

From bd2ad7f259053eca0f41f631706be791dea5abd9 Mon Sep 17 00:00:00 2001
From: Jennifer Vendetti <vendetti@stanford.edu>
Date: Wed, 17 Apr 2024 17:52:36 -0700
Subject: [PATCH 2/2] Generate notification body from template

---
 .../utils/notifications.rb                    | 28 ++++++-------------
 1 file changed, 8 insertions(+), 20 deletions(-)

diff --git a/lib/ontologies_linked_data/utils/notifications.rb b/lib/ontologies_linked_data/utils/notifications.rb
index fecca046..fc28b21b 100644
--- a/lib/ontologies_linked_data/utils/notifications.rb
+++ b/lib/ontologies_linked_data/utils/notifications.rb
@@ -106,28 +106,16 @@ def self.reset_password(user, token)
 
       def self.obofoundry_sync(missing_onts, obsolete_onts)
         ui_name = LinkedData.settings.ui_name
-        subject = "[#{ui_name}] OBO Foundry synchronization report"
-        body = ''
-
-        if missing_onts.size > 0
-          body << "<strong>The following OBO Library ontologies are missing from #{ui_name}:</strong><br/><br/>"
-          missing_onts.each do |ont|
-            body << "<a href='#{ont['homepage']}'>#{ont['id']}</a> (#{ont['title']})<br/><br/>"
-          end
-        end
-
-        if obsolete_onts.size > 0
-          body << '<strong>The following OBO Library ontologies have been deprecated:</strong><br/><br/>'
-          obsolete_onts.each do |ont|
-            body << "<a href='#{ont['homepage']}'>#{ont['id']}</a> (#{ont['title']})<br/><br/>"
-          end
-        end
+        gem_path = Gem.loaded_specs['ontologies_linked_data'].full_gem_path
+        template = File.read(File.join(gem_path, 'views/emails/obofoundry_sync.erb'))
 
-        if body.empty?
-          body << "#{ui_name} and the OBO Foundry are in sync.<br/><br/>"
-        end
+        b = binding
+        b.local_variable_set(:ui_name, ui_name)
+        b.local_variable_set(:missing_onts, missing_onts)
+        b.local_variable_set(:obsolete_onts, obsolete_onts)
+        body = ERB.new(template).result(b)
 
-        Notifier.notify_mails_separately subject, body, [LinkedData.settings.email_sender]
+        Notifier.notify_ontoportal_admins("[#{ui_name}] OBO Foundry synchronization report", body)
       end
 
       NEW_NOTE = <<EOS