diff --git a/generate_template.sh b/generate_template.sh
index 3a5c1b5f..4c2337a3 100755
--- a/generate_template.sh
+++ b/generate_template.sh
@@ -1,6 +1,6 @@
 #!/bin/bash
 
-module load NGS_DNA/3.2.4
+module load NGS_DNA/3.2.3
 module list 
 HOST=$(hostname)
 ##Running script for checking the environment variables
diff --git a/parameters.csv b/parameters.csv
index f600200a..7aab5c2d 100755
--- a/parameters.csv
+++ b/parameters.csv
@@ -10,7 +10,7 @@ checkStage,module list
 ### Tool versions ####
 automateVersion,NGS_Automated/1.0.1
 bwaVersion,BWA/0.7.12-${toolChain}
-computeVersion,v16.07.1-Java-1.8.0_45
+computeVersion,v16.05.1-Java-1.8.0_45
 cutadaptVersion,1.8.1-${toolChain}-Python-2.7.9
 dellyVersion,v0.7.1
 fastqcVersion,FastQC/0.11.3-Java-1.7.0_80
diff --git a/protocols/CopyToResultsDir.sh b/protocols/CopyToResultsDir.sh
index 612ab468..163b7f6e 100755
--- a/protocols/CopyToResultsDir.sh
+++ b/protocols/CopyToResultsDir.sh
@@ -212,8 +212,4 @@ echo "pipeline is finished"
 touch ${logsDir}/${project}.pipeline.finished
 echo "${logsDir}/${project}.pipeline.finished is created"
 
-
-rm *.finished
-rm *.started
-
 touch pipeline.finished