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Processed 598000 variants in 151.979secs,Program received signal SIGSEGV, Segmentation fault.I first suspected that it was a problem with my vcf file because I did not filter for missing sites when filtering, but later I used vcftools to filter, and the result was still the same problem. I downloaded your test data on GitHub, and the results are available. It runs smoothly. Then I found that the INFO column was missing from my data, so I used bcftools to supplement it, bcftools_pluginCommand=plugin fill-tags -Oz -o, But it still doesn't work, and then I found out that my vcf may not be a phased VCF file. I used java - jar beamle.28Jun21.220.jar gt=input.vcf.gz out=phased vcf_file。After processing, it still doesn't work. The information in the picture is my VCF file。Do you know what's going on?
The text was updated successfully, but these errors were encountered:
Processed 598000 variants in 151.979secs,Program received signal SIGSEGV, Segmentation fault.I first suspected that it was a problem with my vcf file because I did not filter for missing sites when filtering, but later I used vcftools to filter, and the result was still the same problem. I downloaded your test data on GitHub, and the results are available. It runs smoothly. Then I found that the INFO column was missing from my data, so I used bcftools to supplement it, bcftools_pluginCommand=plugin fill-tags -Oz -o, But it still doesn't work, and then I found out that my vcf may not be a phased VCF file. I used java - jar beamle.28Jun21.220.jar gt=input.vcf.gz out=phased vcf_file。After processing, it still doesn't work. The information in the picture is my VCF file。Do you know what's going on?
The text was updated successfully, but these errors were encountered: