From e69914c58f18e2a7eb98cf8a9f99c4f7e0670410 Mon Sep 17 00:00:00 2001 From: Florian Kohrt Date: Sat, 25 Jan 2025 23:47:50 +0100 Subject: [PATCH] Various minor improvements --- _01_Example/Manuscript.qmd | 2 +- about.qmd | 4 ++-- index.qmd | 2 +- intro.qmd | 2 +- 4 files changed, 5 insertions(+), 5 deletions(-) diff --git a/_01_Example/Manuscript.qmd b/_01_Example/Manuscript.qmd index f6893fa..5b0543a 100644 --- a/_01_Example/Manuscript.qmd +++ b/_01_Example/Manuscript.qmd @@ -22,7 +22,7 @@ author: roles: - project administration - methodology -date: "`r format(Sys.Date(), '%B %d, %Y')`" +date: "today" lang: en abstract: "This document is a minimal, reproducible manuscript using the penguins data set as an example." keywords: [penguins, reproducibility, minimal, example] diff --git a/about.qmd b/about.qmd index 5965a0e..9487c96 100644 --- a/about.qmd +++ b/about.qmd @@ -24,11 +24,11 @@ grateful::cite_packages( #| output: "asis" #| echo: false -cat(c("Quarto:", as.character(quarto::quarto_version()))) +cat(paste0("Quarto ", as.character(quarto::quarto_version()), " was utilized to render the files.")) ``` ```{r} -#| class.output: "txt code-overflow-scroll" +#| class-output: "txt code-overflow-scroll" sessioninfo::session_info() ``` diff --git a/index.qmd b/index.qmd index d6a467e..78e564f 100644 --- a/index.qmd +++ b/index.qmd @@ -14,7 +14,7 @@ This tutorial covers how to make your code available to others. It wraps up a se While the general principles taught in this tutorial apply to most researchers publishing code, we will make very specific suggestions what tools to use. -In particular, we will assume you have installed [Git](https://git-scm.com/downloads), [R](https://cloud.r-project.org/), [RStudio](https://posit.co/download/rstudio-desktop/), and [Quarto](https://quarto.org/docs/download/). Windows users may additionally need [RTools](https://cloud.r-project.org/bin/windows/Rtools/). +In particular, we will assume you have installed [Git](https://git-scm.com/downloads), [R](https://cloud.r-project.org/), [RStudio](https://posit.co/download/rstudio-desktop/#:~:text=2%3A%20Install%20RStudio), and [Quarto](https://quarto.org/docs/download/). Windows users may additionally need [RTools](https://cloud.r-project.org/bin/windows/Rtools/). ::: {#nte-quarto-alternatives .callout-note collapse="true"} ## Alternatives to Quarto diff --git a/intro.qmd b/intro.qmd index 9192065..11eb082 100644 --- a/intro.qmd +++ b/intro.qmd @@ -6,7 +6,7 @@ In the following, we will set the stage by highlighting the importance of sharin ## The Importance of Sharing -Suppose you are reading an article about a new imaging method to turn seismological data into subsurface images. The article describes the ideas that went into developing this method and presents a few examples to illustrate its superiority over previous approaches. You got interested and would like to apply this method to your own data. However, with only the article available, it could take months to come up with a working solution, if possible at all. This situation has been put aptly by Buckheit & Donoho [-@Buckheit1995, p. 59], distilling an idea by the geophysicist Jon Claerbout: +Suppose you are reading an article about a new imaging method to turn seismological data into subsurface images. The article describes the ideas that went into developing this method and presents a few examples to illustrate its superiority over previous approaches. You got interested and would like to apply this method to your own data. However, with only the article available, it could take months to come up with a working solution, if possible at all. This situation has been put aptly by Buckheit & Donoho [-@Buckheit1995, p. 59, emphasis in original], distilling an idea by the geophysicist Jon Claerbout: > "An article about computational science in a scientific publication is __not__ the scholarship itself, it is merely __advertising__ of the scholarship. The actual scholarship is the complete software development environment and the complete set of instructions which generated the figures."