Change requirements to inequalities for packages with 0.x version to …

…allow better dependency resolving

CHANGELOG

@@ -1,3 +1,6 @@
+v0.2.1
+- Change requirements to inequalities for packages with 0.x version to allow better dependency resolving
+
 v0.2.0
 - Major improvements to GUI and removed unnecessary libraries to reduce file size
 

picked_group_fdr/parsers.py

@@ -87,6 +87,19 @@ def parseMqEvidenceFile(mqEvidenceFile, scoreType, forQuantification = False):
   """
   Reads in approximately 100,000 lines per second with forQuantification=False 
   and 50,000 lines per second with forQuantification=True
+  
+  Columns needed for identification:
+  - Modified sequence
+  - Leading proteins (not used for all methods, but should still be in the input file)
+  - Score/PEP
+  - Experiment
+  
+  Extra columns needed for quantification:
+  - Charge
+  - Intensity
+  - Raw file
+  - Fraction (optional)
+  - Id
   """
   if mqEvidenceFile.endswith('.csv'):
     delimiter = ','

pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "picked_group_fdr"
-version = "0.2.0"
+version = "0.2.1"
 description = "Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments"
 authors = ["Matthew The <[email protected]>"]
 license= "Apache-2.0"
@@ -17,11 +17,11 @@ python = "^3.6.9"
 numpy = "^1.18"
 networkx = "^2.4"
 matplotlib = "^3.3.1"
-triqler = "^0.4.0"
-cython = "^0.29.21"
-llvmlite = "0.31.0"
-mokapot = "^0.3"
-dataclasses = "^0.8"
+triqler = ">=0.4.0"
+cython = ">=0.29.21"
+llvmlite = ">=0.31.0"
+mokapot = ">=0.3"
+dataclasses = ">=0.8"
 
 [tool.poetry.dev-dependencies]
 pytest = "^6.2.4"