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Ready for v0.4.0
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MatthewThe committed May 30, 2023
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2 changes: 1 addition & 1 deletion CHANGELOG
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v0.4.0
- Removed proteins without any PSMs below the FDR threshold. Setting the new `--keep_all_proteins` flag reverts to the old behavior.
- Removed proteins without any PSMs below the FDR threshold from protein groups output. Setting the new `--keep_all_proteins` flag reverts to the old behavior.
- Added support for supplying multiple evidence files
- Added support for mokapot format and allow users to specify methods with custom toml files
- Add `--fasta_contains_decoys` flag and functionality
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2 changes: 1 addition & 1 deletion admin/release_checklist.txt
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2. update version number: poetry version <major/minor/patch>
3. add information to changelog on master
4. commit and push to master on github
5. create a release on github and upload binaries, use the tag naming convention rel-<major>-<minor>-<patch>, e.g. rel-0-01-1
5. create a release on github, use the tag naming convention rel-<major>-<minor>-<patch>, e.g. rel-0-01-1
this automatically triggers a GitHub actions workflow that builds and publishes the packages to TestPyPI and PyPI
6. create a branch on github with the version number
2 changes: 1 addition & 1 deletion pyproject.toml
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[tool.poetry]
name = "picked_group_fdr"
version = "0.3.5"
version = "0.4.0"
description = "Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments"
authors = ["Matthew The <[email protected]>"]
license= "Apache-2.0"
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