From e21b3714bd3efc39d21744cefc6495034b43930b Mon Sep 17 00:00:00 2001 From: Anusri Date: Sat, 28 Oct 2023 14:21:18 +0000 Subject: [PATCH] updated cheanged --- CHANGELOG.md | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index a7f2789f..d790e869 100755 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## Version - 1.4 +- (MAJOR) Bug in chrombpnet modisco_motifs command. seqlets was limited to 50000. If users wanted to change it to 1 million this did not happen. +- Filter peaks at edges for pred_bw command and bias pipleline. So bias evaluation now done on these filtered peaks. +- Preprocessing deafulted to use unix sort. Provided option to switch to bedtools sort. +- Provided option to use filter chromosomes option in preprocessing. + ## Version - 1.3 - Inworks - 2022-12-11 - Changed pipelines to use modisco-lite, old modisco will soon be removed - Added automatic shift scripts to repo and integrated with the pipeline