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screenViz.html
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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<title>RNAi Viz</title>
<link rel="stylesheet" href="style.css">
<link rel="stylesheet" href="svg.css">
<script type="text/javascript" src="./d3.v3.js"></script>
</head>
<body onload="updateChart()">
<div id="chartTitle">
</div>
<!--
<div id="lineSelector">
Treated line <input type="text" id="treatedLine" value=".74" size="3"/>
Untreated line <input type="text" id="untreatedLine" value="1" size="3"/>
Fold line <input type="text" id="foldLine" value=".74" size="3"/>
</div>
-->
<div id="menu2">
<ul id="disease-menu"></ul>
</div>
<div id="wrapper">
<div id="chart"></div>
<div id="title">
<h1>RNAiViz</h1>
</div>
<div id="geneView">
<ul id="hitList"></ul>
</div>
<div id="dataInfo">
<table>
<tr><td>Gene</td><td id="geneName"></td></tr>
<tr><td>Fold change</td><td id="foldChange"/></td></tr>
<tr><td>Pvalue</td><td id="pvalue"/></td></tr>
<tr><td>Mut %</td><td id="mut"/></td></tr>
<tr><td>Amp %</td><td id="amp"/></td></tr>
<tr><td>Del %</td><td id="del"/></td></tr>
</table>
<textarea id="geneHighlight" rows="5" cols="40"></textarea>
<a id="DoGeneHighlight">Highlight genes </a>
<p/>
<table>
<tr><td>Fold change</td><td><input type="text" id="foldThreshold" value="100"/></td></tr>
<tr><td>Pvalue</td><td><input type="text" id="pvalueThreshold" value="1"/></td></tr>
<tr><td>Mut %</td><td><input type="text" id="mutThreshold" value="100"/></td></tr>
<tr><td>Amp %</td><td><input type="text" id="ampThreshold" value="100"/></td></tr>
<tr><td>Del %</td><td><input type="text" id="delThreshold" value="100"/></td></tr>
</table>
<a id="DoGeneFilters">Apply filters</a>
</div>
<script src="screenViz.js"></script>
<script src="scatterView.js"></script>
</div>
</body>
</html>