From 82b82964ceacb8d8567e2c7013ddbcc01904d0ea Mon Sep 17 00:00:00 2001 From: Glenn Hickey Date: Mon, 13 Jun 2022 13:48:18 -0400 Subject: [PATCH 1/2] update to latest lastz --- submodules/lastz | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/submodules/lastz b/submodules/lastz index d406935..ed4bb71 160000 --- a/submodules/lastz +++ b/submodules/lastz @@ -1 +1 @@ -Subproject commit d406935d9b0def202cd222ca1462736283e70f53 +Subproject commit ed4bb7118a256871a36a4515ffbe836ba4208424 From b83c66860665a0a9341dac849bad72c0fae1ace6 Mon Sep 17 00:00:00 2001 From: Glenn Hickey Date: Tue, 26 Jul 2022 11:07:56 -0400 Subject: [PATCH 2/2] Write empty (rather than invalid) output when no alignment found --- scripts/run_segalign | 2 -- 1 file changed, 2 deletions(-) diff --git a/scripts/run_segalign b/scripts/run_segalign index 0e64e3e..f745e5d 100755 --- a/scripts/run_segalign +++ b/scripts/run_segalign @@ -189,8 +189,6 @@ else fi fi - else - echo "No alignment generated" fi rm -rf $OUTPUT_FOLDER