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DESCRIPTION
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Package: GagnonMR
Title: Perform Mendelian randomization analysis in an automated concise way
Version: 0.0.0.9000
Authors@R:
person(given = "Eloi",
family = "Gagnon",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "YOUR-ORCID-ID"))
Description: Here is a repository for all functions developped by Éloi for performing Mendelian Randomization articles.
The package builds greatly on TwoSampleMr package. All functions work in a pipeline manner, from cleaning raw summary statistics to plotting results.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Imports:
data.table,
varhandle,
MendelianRandomization,
magrittr,
dplyr,
grid,
BiocManager,
biomaRt,
coloc,
genetics.binaRies,
ggplot2,
mr.raps,
plyr,
scales,
tidyr,
susieR,
purrr,
stringr,
VariantAnnotation,
ggrepel,
pryr,
S4Vectors,
ckbplotr,
forestploter,
survival
Suggests:
testthat (>= 3.0.0)
Remotes:
MRCIEU/TwoSampleMR,
MRCIEU/ieugwasr,
MRCIEU/gwasglue,
MRCIEU/gwasvcf,
jrs95/hyprcoloc,
WSpiller/MVMR,
jrs95/gassocplot
Config/testthat/edition: 3