Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Extend FAIR Genomes with full ISA-Tab schema for X-omics #105

Open
joerivandervelde opened this issue Aug 31, 2021 · 0 comments
Open

Extend FAIR Genomes with full ISA-Tab schema for X-omics #105

joerivandervelde opened this issue Aug 31, 2021 · 0 comments
Labels
Enhancement New feature or request Mapping Issue related to mapping the schema to other models Modeling An issue related to modeling the schema

Comments

@joerivandervelde
Copy link
Collaborator

Do first:
Harmonize Study with (semantic) ISA-TAB #70

Then: add 'isa-tab.yml' schema to extend 'fair-genomes.yml', containing all ISA-Tab attributes. Use-case: FDP in X-omics. For this, we need to re-think the architecture of the project. Is this always included in the outputs? or optionally configured? or connected in a separate project?

Resources to use:

ISA-SIO mapping
https://docs.google.com/spreadsheets/d/1QwIULd4Kxq1wjzkGArnORf156LEw2sxo_FqW_eY3Zas/edit#gid=0

ISA-OBI mapping
https://docs.google.com/spreadsheets/d/19SRjt969ImIfprAJvm8BNYXHiYuKSbbd2fGiyPKDTZQ/edit#gid=2005633675

@joerivandervelde joerivandervelde added Enhancement New feature or request Mapping Issue related to mapping the schema to other models Modeling An issue related to modeling the schema labels Aug 31, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Enhancement New feature or request Mapping Issue related to mapping the schema to other models Modeling An issue related to modeling the schema
Projects
None yet
Development

No branches or pull requests

1 participant