🐛 Bug Report: Errors when pulling from DockerHub

[GemmaTuron]

When I pull this model from DockerHub, I get the following errors:

11:01:33 | DEBUG    | Copying information file from model container
9b2989e5ec6f1ee16928c2b4cda4841841fc5906262bd6c0ddfa754ba4eb6cac
Successfully copied 61.4kB to /home/gturon/eos/dest/eos78ao/information.json
d14cf1bb-4458-44cd-9894-dcdf8ddfb981
11:01:34 | DEBUG    | Copying api_schema_file file from model container
f138d731316cb16f70891a0ecd437c21c9dcff3e4985dac4fbb0c23dfaf9fb2a
Successfully copied 51.7kB to /home/gturon/eos/dest/eos78ao/api_schema.json
df8560d0-4eea-4bdc-94bf-2b092ee1e72c
11:01:35 | DEBUG    | Copying status file from model container
faddfbcf044476afb82771fcced4f610681353787c730594f7c55ac77e3174a0
Successfully copied 2.05kB to /home/gturon/eos/dest/eos78ao/status.json
6512e73f-1011-4636-a993-abbad4b5a594
4399066628fbfd788156af301a60293e05c54942da46234f05b81e7fdb129728
invalid output path: directory "/home/gturon/eos/dest/eos78ao/model/framework/examples" does not exist
23da8e32-d444-44a7-978e-b113dc973669
d12b7f6d5ee8306a83a822ab95fb0ac4c6c025e2e717471782fa5781532a2fce
invalid output path: directory "/home/gturon/eos/dest/eos78ao/model/framework/examples" does not exist
40faf475-c306-4faf-9b13-1a4a0534cc1b
1c91e33cc7bd568d985427fd39a340078dcf43ffd79b7d8d519a9287d436040c
invalid output path: directory "/home/gturon/eos/dest/eos78ao/model/framework" does not exist
df17a362-bb19-4ef5-94ac-6f600dcdda29
3c2675e4adb961da68c796fac01efc47d0df5969e3df9952cc416290bb667d0e
invalid output path: directory "/home/gturon/eos/dest/eos78ao/model/framework" does not exist
338728c3-fac3-4906-aa2a-59875d70b551
48789d8ec616db39c702442dac997931ff019d2cd571a038dec969f08ea2e1f6
Error response from daemon: Could not find the file /root/eos/dest/eos78ao/example.csv in container 2325b498-706b-465a-8757-a3d2495bca5e
2325b498-706b-465a-8757-a3d2495bca5e

[DhanshreeA]

Thanks @GemmaTuron - this is an issue from when we try to copy assets from inside the container to the EOS directory, so ersilia CLI can pick them up and use them (for example, in the ersilia example --predefined command. Since this is an ersilia issue, that is, the output path in the EOS directory, doesn't exist to where we want to copy these files, I will transfer this issue to the main repo.

[DhanshreeA]

Related to #1269

[GemmaTuron]

Hi @DhanshreeA

Can this cause the model to fail or is just a warning? Ersilia is simply not working on my ubuntu and this error keeps showing up:

13:44:40 | DEBUG    | Copying information file from model container
13:44:40 | DEBUG    | Resolving pack method
13:44:41 | DEBUG    | Resolved pack method: bentoml
365331da30eb8c183072ad0c908cb691ef4609bea224d1caad6df57b9f0ea8bc
Error response from daemon: Could not find the file /root/eos/dest/eos3b5e/information.json in container b22c0562-463e-467d-a9ea-ad7c12ba80fd
b22c0562-463e-467d-a9ea-ad7c12ba80fd
13:44:41 | ERROR    | Information file not found, not modifying anything
13:44:41 | DEBUG    | Copying api_schema_file file from model container
51cfa80b37a8a20d75572da95c756d5dedf7c1a8cbc4739917772de80b034458
Error response from daemon: Could not find the file /root/eos/dest/eos3b5e/api_schema.json in container 8da65d7f-af19-44fc-87ab-e49034f28c6f
8da65d7f-af19-44fc-87ab-e49034f28c6f
13:44:41 | DEBUG    | Copying status file from model container
9924a8a7cd605f9eda6a16b949b1a242d15e5a63b3b60716e732c938a419594b
Error response from daemon: Could not find the file /root/eos/dest/eos3b5e/status.json in container 455a4bef-4f6a-49ac-9b1e-bdfd64b77040
455a4bef-4f6a-49ac-9b1e-bdfd64b77040
517bb0a305fd6e776c71776a9cc44491a2d7fb5174b90a5889d06d3f1019a4b8
invalid output path: directory "/home/gturon/eos/dest/eos3b5e/model/framework/examples" does not exist
162faf7f-92fa-4f02-a6dc-ce4d15289738
87d3133b01c004a8f3b41f38f4d8924b2efa9a64751281eddc69cd936d43c3d6
invalid output path: directory "/home/gturon/eos/dest/eos3b5e/model/framework/examples" does not exist
b013a723-5cf0-42df-914b-dffcfc0a44d2
c0e4b3b8f4a2f2ff9483ba86dc6b247ed02e4d2cd75e8a9a9c09b88cc5edb2e1
invalid output path: directory "/home/gturon/eos/dest/eos3b5e/model/framework" does not exist
e24eea0a-5e64-438f-8dda-86cd5f81381f
dc03315d5c536e0f23e70ccf13f64ed5d89096c3e58a52ed62d6eb9e9d08575c
invalid output path: directory "/home/gturon/eos/dest/eos3b5e/model/framework" does not exist
6401ce91-6621-4450-8421-c94b1f75d9b7
92e551f91378ede5ba4a10fc14dff28176604ef14ffe5194a6f705c5c13c4503
Error response from daemon: Could not find the file /root/eos/dest/eos3b5e/example.csv in container b3251d94-35ce-4feb-8b70-2bfd9c955f11
b3251d94-35ce-4feb-8b70-2bfd9c955f11

Full error also attached. Running on Ubutnu24.04 LTS with a fresh conda env on py3.11 and ersilia 0.1.40 installed

eos3b5e_error.txt

More info: seems to be model dependent? For example eos9ivc could fetch and only complained about the output paths but not the .json files. It did not have to "Resolving pack method" in this one either. Why?

13:58:07 | DEBUG    | Copying information file from model container
48672d1f9b0927f14f5b97c3fd3a158766ed063e58760463e076abf087e8a579
Successfully copied 6.14kB to /home/gturon/eos/dest/eos9ivc/information.json
c4be62f9-933d-49a3-b930-3086e64de18e
13:58:07 | DEBUG    | Copying api_schema_file file from model container
d0ca5740577e039a1e51149fdd5e1f6b1f8439bcf181b1b221470b5de3ad9cdf
Successfully copied 2.56kB to /home/gturon/eos/dest/eos9ivc/api_schema.json
283596ec-f1ca-43c7-b70f-fb305fcc273a
13:58:08 | DEBUG    | Copying status file from model container
35f2d96aa4c8ed65888fe619f894ac0ed929eaa367918db0f852add036c49b37
Successfully copied 2.05kB to /home/gturon/eos/dest/eos9ivc/status.json
71d14da7-5faf-4292-bcdc-cab7af265de8
d6b116c1c74699ea32a76145759fd6fdf6580e0d8bc3b636a4e4f05a21d4add3
invalid output path: directory "/home/gturon/eos/dest/eos9ivc/model/framework/examples" does not exist
06a0c4e6-2215-47e4-b27d-a8dc9cad8577
fb9c6177feb588a60beb162fc02bcc5ebdc578b847fdbf2931b390b14c411cd9
invalid output path: directory "/home/gturon/eos/dest/eos9ivc/model/framework/examples" does not exist
b4626fe0-9f92-4dc2-ab32-1a27337e9d76
29f49974f38eb470634adaf5de9739a136201125bcc419b9db26289b3e57cb44
invalid output path: directory "/home/gturon/eos/dest/eos9ivc/model/framework" does not exist
237cbbd7-a2f3-4eb1-8c8d-412d4f6cac31
906be2667e2cdb52d2f24c44dcce1d0812609e6200073767a7c7174727e8a577
invalid output path: directory "/home/gturon/eos/dest/eos9ivc/model/framework" does not exist
03ea968d-6495-48c2-952a-b455d3648780
2bbe045d58a9024e97c3d06f5d82b2dd8650018687517337ec08a15273530289
Error response from daemon: Could not find the file /root/eos/dest/eos9ivc/example.csv in container c14f609d-5144-4e48-a344-c8d0f2cce4e8
c14f609d-5144-4e48-a344-c8d0f2cce4e8

eos9ivc.txt