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DESCRIPTION
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Package: scKirby
Type: Package
Title: Automated ingestion and conversion of various single-cell data formats.
Version: 0.1.0
Authors@R: c(person(given = "Brian",
family = "Schilder",
role = c("cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0001-5949-2191")) )
Description: Automated ingestion and conversion of various single-cell data formats.
License: GPL (>= 3) + file LICENSE.md
URL: https://github.com/bschilder/scKirby
BugReports: https://github.com/bschilder/scKirby/issues
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6.0)
SystemRequirements: Python (>= 3.7.0)
biocViews:
Imports:
remotes,
magrittr,
BiocManager,
dplyr,
tibble,
data.table,
Matrix,
SparseM,
DescTools,
reticulate,
S4Vectors,
Seurat,
SeuratDisk,
anndata,
SummarizedExperiment,
SingleCellExperiment,
DelayedArray,
BiocParallel,
parallel,
HDF5Array,
rhdf5
Remotes:
github::mojaveazure/seurat-disk,
github::mojaveazure/loomR,
github::cellgeni/sceasy,
github::cole-trapnell-lab/leidenbase,
github::cole-trapnell-lab/monocle3
Suggests:
rmarkdown,
knitr,
loomR,
LoomExperiment,
sceasy,
leidenbase,
monocle3,
monocle
VignetteBuilder: knitr
RoxygenNote: 7.1.1