Gamma index comparison code (low dose threshold)

[wahln]

Discussed in #770

^{Originally posted by Pornpapas September 17, 2024}
Dear developer

I have a question about the gamma index code (matRad_gammaIndex.m) in the tools folder regarding whether the low dose threshold is set? (such as 10% low dose threshold).

Thank you

[wahln]

As discussed in #770 , we should probably add a customizable low-dose threshold to the matRad_gammaIndex.m function

[wahln]

I also suggest to do a full overhaul of the matRad_gammaIndex. Since there is many optional / default parameters, it would probably make more sense to create a new function matRad_gammaAnalysis(referenceCube, inputCube, doseCriterion, distanceCriterion, varargin) where varargin are multiple pairs of values, like

• doseThreshold
• gridRefCube
• gridInputCube
• interpolationPoints (or Grid?)
  and so on...