feat(action.go): add ontology loading functionality to LoadOntologyTo…

…Table function

The LoadOntologyToTable function now has the ability to load ontology
data into the table. This is achieved by adding a new import statement
for the ontology package and creating a new LoadProperties object. The
function now checks if the ontology table fields were successfully
created and if so, it either loads new ontology data or updates existing
data. If the table fields were not created, it only loads new data.

internal/baserow/cli/action.go

@@ -6,6 +6,7 @@ import (
 
 	"github.com/dictyBase/modware-import/internal/baserow/client"
 	"github.com/dictyBase/modware-import/internal/baserow/database"
+	"github.com/dictyBase/modware-import/internal/baserow/ontology"
 	"github.com/dictyBase/modware-import/internal/collection"
 	"github.com/dictyBase/modware-import/internal/registry"
 	"github.com/urfave/cli/v2"
@@ -93,7 +94,7 @@ func LoadOntologyToTable(cltx *cli.Context) error {
 		"Id":          client.TEXT,
 		"Is_obsolete": client.BOOLEAN,
 	}
-	err := database.CreateOntologyTableFields(
+	ok, err := database.CreateOntologyTableFields(
 		&database.OntologyTableFieldsProperties{
 			Client:   bclient,
 			Logger:   logger,
@@ -105,6 +106,22 @@ func LoadOntologyToTable(cltx *cli.Context) error {
 	if err != nil {
 		return cli.Exit(err.Error(), 2)
 	}
+	props := &ontology.LoadProperties{
+		File:    cltx.String("input"),
+		TableId: cltx.Int("table-id"),
+		Token:   cltx.String("token"),
+		Client:  bclient,
+		Logger:  logger,
+	}
+	if ok {
+		if err := ontology.LoadNewOrUpdate(props); err != nil {
+			return cli.Exit(err.Error(), 2)
+		}
+		return nil
+	}
+	if err := ontology.LoadNew(props); err != nil {
+		return cli.Exit(err.Error(), 2)
+	}
 
 	return nil
 }