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R-CMD-check.yml
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on:
push:
branches:
- master
pull_request:
branches:
- master
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: windows-latest, r: 'devel'}
- {os: windows-latest, r: 'release'}
- {os: windows-latest, r: 'oldrel'}
- {os: macOS-latest, r: 'devel'}
- {os: macOS-latest, r: 'release'}
- {os: macOS-latest, r: 'oldrel'}
- {os: ubuntu-16.04, r: 'devel'}
- {os: ubuntu-16.04, r: 'release'}
- {os: ubuntu-16.04, r: 'oldrel'}
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
CRAN: ${{ matrix.config.cran }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-r@master
with:
r-version: ${{ matrix.config.r }}
- uses: r-lib/actions/setup-pandoc@master
- uses: r-lib/actions/setup-tinytex@v1
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Install system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"
- name: Install dependencies
run: |
install.packages("BiocManager")
BiocManager::install("graph")
BiocManager::install("Rgraphviz")
install.packages("knitr")
install.packages("udpipe")
install.packages("BTM")
install.packages("igraph")
install.packages("qgraph")
install.packages("glasso")
install.packages("ggplot2")
install.packages("ggraph")
install.packages("ggforce")
install.packages("concaveman")
remotes::install_deps(pkgdir = ".", dependencies = TRUE)
shell: Rscript {0}
- name: Session info
run: |
options(width = 100)
pkgs <- installed.packages()
pkgs[, c("Version"), drop = FALSE]
shell: Rscript {0}
- name: Check
env:
_R_CHECK_CRAN_INCOMING_: false
run: |
R CMD INSTALL ../textplot
R CMD build .
R CMD check --as-cran --no-manual --no-vignettes --no-tests --run-donttest *tar.gz
R CMD check --as-cran --no-manual --no-vignettes *tar.gz
R CMD check --as-cran --no-manual *tar.gz
- name: Upload check results
if: failure()
uses: actions/upload-artifact@master
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check