From 7be28821924b8080a319319ad2cde3aaac4018b8 Mon Sep 17 00:00:00 2001 From: Nalika Palayoor Date: Tue, 28 Jan 2025 11:15:44 -0500 Subject: [PATCH] Rebase athribonc --- src/bioregistry/data/bioregistry.json | 18 ++++++++++++++++++ src/bioregistry/data/curated_papers.tsv | 17 +++++++++++++++-- 2 files changed, 33 insertions(+), 2 deletions(-) diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json index e1c7e7fec..58e931821 100644 --- a/src/bioregistry/data/bioregistry.json +++ b/src/bioregistry/data/bioregistry.json @@ -4078,6 +4078,24 @@ "name": "Arabidopsis Information Portal", "prefix": "768" }, + "providers": [ + { + "code": "athribonc", + "description": "Arabidopsis thaliana Ribosomal Non-Coding RNAs are small RNA molecules that play regulartory roles in gene expression. This database improvs the ability to explore the coding of plant ncRNAs", + "homepage": "https://bis.zju.edu.cn/athribonc/", + "name": "Arabidopsis thaliana Ribosomal Non-Coding", + "publications": [ + { + "doi": "10.1093/database/baae123", + "pmc": "PMC11651143", + "pubmed": "39689042", + "title": "AthRiboNC: an Arabidopsis database for ncRNAs with coding potential revealed from ribosome profiling", + "year": 2024 + } + ], + "uri_format": "https://bis.zju.edu.cn/athribonc/miRNA/AT5G07875" + } + ], "publications": [ { "doi": "10.1093/nar/gku1200", diff --git a/src/bioregistry/data/curated_papers.tsv b/src/bioregistry/data/curated_papers.tsv index 9c5f6a599..f27179b8f 100644 --- a/src/bioregistry/data/curated_papers.tsv +++ b/src/bioregistry/data/curated_papers.tsv @@ -120,7 +120,10 @@ pubmed relevant orcid date_curated relevancy_type pr_added notes 39607847 0 0009-0009-5240-7463 2024-12-03 irrelevant_other 1296 39611775 0 0009-0009-5240-7463 2024-12-11 non_resource_paper 1305 39616207 0 0009-0009-5240-7463 2024-12-09 irrelevant_other 1305 -39624166 0 0009-0008-8406-631X 2025-01-23 not_identifiers_resource 1377 +39617063 0 0009-0008-8406-631X 2025-01-25 irrelevant_other 1380 +39619768 0 0009-0008-8406-631X 2025-01-25 not_identifiers_resource 1380 +39622863 0 0009-0008-8406-631X 2025-01-25 irrelevant_other 1380 +39624166 0 0009-0008-8406-631X 2025-01-25 not_identifiers_resource 1380 39626458 0 0009-0009-5240-7463 2024-12-10 not_identifiers_resource 1305 39629064 0 0009-0009-5240-7463 2024-12-09 not_identifiers_resource 1305 39629325 0 0009-0008-8406-631X 2025-01-21 irrelevant_other 1372 @@ -129,22 +132,28 @@ pubmed relevant orcid date_curated relevancy_type pr_added notes 39633021 1 0009-0009-5240-7463 2024-12-12 new_prefix 1327 Identifiers for lipid-protein interactions 39633723 0 0009-0009-5240-7463 2024-12-11 not_identifiers_resource 1305 39638848 0 0009-0008-8406-631X 2025-01-23 irrelevant_other 1377 +39646664 0 0009-0008-8406-631X 2025-01-24 non_resource_paper 1380 39651210 0 0009-0009-5240-7463 2024-12-09 not_identifiers_resource 1305 39651266 0 0009-0009-5240-7463 2024-12-11 non_resource_paper 1305 39651293 0 0009-0009-5240-7463 2024-12-09 irrelevant_other 1305 +39656773 0 0009-0008-8406-631X 2025-01-24 irrelevant_other 1380 39656924 0 0009-0008-8406-631X 2025-01-21 existing 1372 39657049 0 0009-0008-8406-631X 2025-01-17 non_resource_paper 1372 +39657122 0 0009-0008-8406-631X 2025-01-24 not_identifiers_resource 1380 39657145 0 0009-0008-8406-631X 2025-01-17 not_identifiers_resource 1364 39657146 0 0009-0008-8406-631X 2025-01-17 non_resource_paper 1364 unable to resolve identifiers because format is xcel spreadsheet -39657158 0 0009-0008-8406-631X 2025-01-23 not_identifiers_resource 1377 +39657158 0 0009-0008-8406-631X 2025-01-24 not_identifiers_resource 1380 39659497 0 0009-0008-8406-631X 2025-01-07 irrelevant_other 1351 39660292 0 0009-0008-8406-631X 2025-01-07 irrelevant_other 1351 39660842 0 0009-0008-8406-631X 2025-01-17 not_identifiers_resource 1364 39661723 1 0009-0008-8406-631X 2025-01-21 new_prefix 1374 +39665565 0 0009-0008-8406-631X 2025-01-24 non_resource_paper 1380 +39670335 0 0009-0008-8406-631X 2025-01-24 non_resource_paper 1380 39670819 0 0009-0008-8406-631X 2025-01-10 irrelevant_other 1351 39672676 0 0009-0008-8406-631X 2025-01-14 irrelevant_other 1364 39674175 0 0009-0008-8406-631X 2025-01-21 irrelevant_other 1372 39677843 0 0009-0008-8406-631X 2025-01-21 irrelevant_other 1372 +39678209 0 0009-0008-8406-631X 2025-01-24 irrelevant_other 1380 39684768 0 0009-0008-8406-631X 2025-01-14 irrelevant_other 1364 39686380 0 0009-0008-8406-631X 2025-01-23 irrelevant_other 1377 39686612 0 0009-0008-8406-631X 2025-01-23 non_resource_paper 1377 unable to resolve identifiers because format is xcel spreadsheet @@ -152,13 +161,17 @@ pubmed relevant orcid date_curated relevancy_type pr_added notes 39687250 0 0009-0008-8406-631X 2025-01-07 irrelevant_other 1351 39687386 0 0009-0008-8406-631X 2025-01-23 not_identifiers_resource 1377 39687760 0 0009-0008-8406-631X 2025-01-10 non_resource_paper 1351 +39689042 1 0009-0008-8406-631X 2025-01-28 new_provider 1383 Provider for TAIR identifiers +39689177 0 0009-0008-8406-631X 2025-01-24 irrelevant_other 1380 39690206 0 0009-0008-8406-631X 2025-01-23 non_resource_paper 1377 39693482 0 0009-0008-8406-631X 2025-01-14 not_identifiers_resource 1364 +39697868 0 0009-0008-8406-631X 2025-01-24 not_identifiers_resource 1380 39702578 0 0009-0008-8406-631X 2025-01-17 irrelevant_other 1372 39703015 0 0009-0008-8406-631X 2025-01-07 irrelevant_other 1351 39703430 1 0009-0008-8406-631X 2025-01-10 new_prefix 1362 39705712 0 0009-0008-8406-631X 2025-01-23 not_identifiers_resource 1377 39709561 0 0009-0008-8406-631X 2025-01-17 irrelevant_other 1372 +39710433 0 0009-0008-8406-631X 2025-01-24 not_identifiers_resource 1380 39714043 0 0009-0008-8406-631X 2025-01-23 irrelevant_other 1377 39719062 0 0009-0008-8406-631X 2025-01-07 not_identifiers_resource 1351 39720527 0 0009-0008-8406-631X 2025-01-23 not_identifiers_resource 1377