diff --git a/Project.toml b/Project.toml index 09827c95..6b8154db 100644 --- a/Project.toml +++ b/Project.toml @@ -1,7 +1,7 @@ name = "GhostKnockoffGWAS" uuid = "28dc8d00-4921-4061-9921-3f423e4be5cc" authors = ["Benjamin Chu "] -version = "0.2.0" +version = "0.2.1" [deps] ArgParse = "c7e460c6-2fb9-53a9-8c5b-16f535851c63" diff --git a/docs/src/man/download.ipynb b/docs/src/man/download.ipynb index c7b41261..3fc67d31 100644 --- a/docs/src/man/download.ipynb +++ b/docs/src/man/download.ipynb @@ -10,9 +10,9 @@ "\n", "## Software\n", "\n", - "| Operating System | v0.2.0 (June 27th, 2024) |\n", + "| Operating System | v0.2.1 (June 28th, 2024) |\n", "| :--- | :----: |\n", - "| Linux 64-bit | [Download](https://github.com/biona001/GhostKnockoffGWAS/releases/tag/v0.2.0) |\n", + "| Linux 64-bit | [Download](https://github.com/biona001/GhostKnockoffGWAS/releases/tag/v0.2.1) |\n", "\n", "After unzipping, the executable will be located inside `bin/GhostKnockoffGWAS`. We recommend adding the folder containing the `GhostKnockoffGWAS` executable to `PATH` for easier access." ] diff --git a/docs/src/man/download.md b/docs/src/man/download.md index af289df8..7afabdb2 100644 --- a/docs/src/man/download.md +++ b/docs/src/man/download.md @@ -5,9 +5,9 @@ Here is the main downloads page. New software and pre-processed knockoff data wi ## Software -| Operating System | v0.2.0 (June 27th, 2024) | +| Operating System | v0.2.1 (June 28th, 2024) | | :--- | :----: | -| Linux 64-bit | [Download](https://github.com/biona001/GhostKnockoffGWAS/releases/tag/v0.2.0) | +| Linux 64-bit | [Download](https://github.com/biona001/GhostKnockoffGWAS/releases/tag/v0.2.1) | After unzipping, the executable will be located inside `bin/GhostKnockoffGWAS`. We recommend adding the folder containing the `GhostKnockoffGWAS` executable to `PATH` for easier access. diff --git a/docs/src/man/examples.ipynb b/docs/src/man/examples.ipynb index 9570494f..bde70c03 100644 --- a/docs/src/man/examples.ipynb +++ b/docs/src/man/examples.ipynb @@ -14,7 +14,7 @@ "\n", "1. Step 1: Download pre-processed LD files and binary executable and extract their content\n", "\n", - " wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.0/app_linux_x86.tar.gz\n", + " wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.1/app_linux_x86.tar.gz\n", " wget https://zenodo.org/records/10433663/files/EUR.zip\n", " tar -xvzf app_linux_x86.tar.gz\n", " unzip EUR.zip # decompresses to ~8.7GB\n", @@ -36,7 +36,7 @@ "\n", "Proceed to the [Downloads page](https://biona001.github.io/GhostKnockoffGWAS/dev/man/download) and download (1) the software as well as (2) a pre-processed knockoff dataset suitable for your analysis, e.g.\n", "```shell\n", - "wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.0/app_linux_x86.tar.gz\n", + "wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.1/app_linux_x86.tar.gz\n", "wget https://zenodo.org/records/10433663/files/EUR.zip\n", "```\n", "Next, unzip the files in linux command line via:\n", diff --git a/docs/src/man/examples.md b/docs/src/man/examples.md index 219c1422..95fc1462 100644 --- a/docs/src/man/examples.md +++ b/docs/src/man/examples.md @@ -9,7 +9,7 @@ Here is a short summary of this tutorial: 1. Step 1: Download pre-processed LD files and binary executable and extract their content - wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.0/app_linux_x86.tar.gz + wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.1/app_linux_x86.tar.gz wget https://zenodo.org/records/10433663/files/EUR.zip tar -xvzf app_linux_x86.tar.gz unzip EUR.zip # decompresses to ~8.7GB @@ -26,7 +26,7 @@ Here is a short summary of this tutorial: Proceed to the [Downloads page](https://biona001.github.io/GhostKnockoffGWAS/dev/man/download) and download (1) the software as well as (2) a pre-processed knockoff dataset suitable for your analysis, e.g. ```shell -wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.0/app_linux_x86.tar.gz +wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.1/app_linux_x86.tar.gz wget https://zenodo.org/records/10433663/files/EUR.zip ``` Next, unzip the files in linux command line via: diff --git a/docs/src/man/intro.ipynb b/docs/src/man/intro.ipynb index 6b36a6bd..0db107ce 100644 --- a/docs/src/man/intro.ipynb +++ b/docs/src/man/intro.ipynb @@ -40,7 +40,7 @@ "\n", "1. Go to [Download Page](https://biona001.github.io/GhostKnockoffGWAS/dev/man/download) and download (1) the software and (2) the pre-processed LD files. For example,\n", "\n", - " wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.0/app_linux_x86.tar.gz\n", + " wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.1/app_linux_x86.tar.gz\n", " wget https://zenodo.org/records/10433663/files/EUR.zip\n", "2. Unzip them both:\n", "\n", diff --git a/docs/src/man/intro.md b/docs/src/man/intro.md index 7994a506..127ceba0 100644 --- a/docs/src/man/intro.md +++ b/docs/src/man/intro.md @@ -25,7 +25,7 @@ Most users are expected to follow this workflow. Detailed explanations for each 1. Go to [Download Page](https://biona001.github.io/GhostKnockoffGWAS/dev/man/download) and download (1) the software and (2) the pre-processed LD files. For example, - wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.0/app_linux_x86.tar.gz + wget https://github.com/biona001/GhostKnockoffGWAS/releases/download/v0.2.1/app_linux_x86.tar.gz wget https://zenodo.org/records/10433663/files/EUR.zip 2. Unzip them both: