From d8ea1f9f7e97df4d03917cb3dd133ca1fc7b0fe9 Mon Sep 17 00:00:00 2001
From: carlosuc3m <100329787@alumnos.uc3m.es>
Date: Tue, 14 Jan 2025 17:05:17 +0100
Subject: [PATCH] preprocess the inputs

---
 src/main/java/io/bioimage/modelrunner/model/Stardist3D.java | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/src/main/java/io/bioimage/modelrunner/model/Stardist3D.java b/src/main/java/io/bioimage/modelrunner/model/Stardist3D.java
index 6813d0ca..c1e5675f 100644
--- a/src/main/java/io/bioimage/modelrunner/model/Stardist3D.java
+++ b/src/main/java/io/bioimage/modelrunner/model/Stardist3D.java
@@ -48,6 +48,7 @@
 import io.bioimage.modelrunner.exceptions.LoadEngineException;
 import io.bioimage.modelrunner.exceptions.LoadModelException;
 import io.bioimage.modelrunner.exceptions.RunModelException;
+import io.bioimage.modelrunner.model.processing.Processing;
 import io.bioimage.modelrunner.runmode.RunMode;
 import io.bioimage.modelrunner.runmode.ops.GenericOp;
 import io.bioimage.modelrunner.tensor.Tensor;
@@ -244,6 +245,8 @@ RandomAccessibleInterval<T> predict(RandomAccessibleInterval<T> image) throws Mo
 		
 		Model model = Model.createBioimageioModel(this.descriptor.getModelPath());
 		model.loadModel();
+		Processing processing = Processing.init(descriptor);
+		inputList = processing.preprocess(inputList, false);
 		model.runModel(inputList, outputList);
 
 		return Utils.transpose(Cast.unchecked(postProcessing(outputList.get(0).getData())));