diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 0000000..5c450ac --- /dev/null +++ b/Dockerfile @@ -0,0 +1,18 @@ +FROM nixos/nix + +# Enable flakes +RUN mkdir -p ~/.config/nix && \ + echo "experimental-features = nix-command flakes" >> ~/.config/nix/nix.conf + +# Create and set working directory +WORKDIR /app + +# Copy your flake files +COPY flake.nix flake.lock ./ + +# Build the development environment +RUN nix develop --command echo "Development environment ready" + +# Default command to drop into the dev shell +ENTRYPOINT ["nix", "develop"] +CMD ["/bin/bash"] diff --git a/flake.lock b/flake.lock new file mode 100644 index 0000000..34bc789 --- /dev/null +++ b/flake.lock @@ -0,0 +1,109 @@ +{ + "nodes": { + "flake-utils": { + "inputs": { + "systems": "systems" + }, + "locked": { + "lastModified": 1731533236, + "narHash": "sha256-l0KFg5HjrsfsO/JpG+r7fRrqm12kzFHyUHqHCVpMMbI=", + "owner": "numtide", + "repo": "flake-utils", + "rev": "11707dc2f618dd54ca8739b309ec4fc024de578b", + "type": "github" + }, + "original": { + "owner": "numtide", + "repo": "flake-utils", + "type": "github" + } + }, + "hdt-cpp": { + "inputs": { + "flake-utils": [ + "flake-utils" + ], + "nixpkgs": [ + "nixpkgs" + ] + }, + "locked": { + "lastModified": 1695663107, + "narHash": "sha256-uYHG4+WvYykdWWU2LjmirgenMKpZ6+E1otmztIdQBPc=", + "owner": "insilica", + "repo": "nix-hdt", + "rev": "5451dd285423e5a2c386dc05b1bf10d93654df56", + "type": "github" + }, + "original": { + "owner": "insilica", + "repo": "nix-hdt", + "type": "github" + } + }, + "hdt-java": { + "inputs": { + "flake-utils": [ + "flake-utils" + ], + "nixpkgs": [ + "nixpkgs" + ] + }, + "locked": { + "lastModified": 1703427866, + "narHash": "sha256-v9bbOOPWvFNqo/ZajeJtPDMon55Mecp2pKJazH2ym/4=", + "owner": "insilica", + "repo": "nix-hdt-java", + "rev": "c93517364fbed1fef70736834cf2661a1470a21f", + "type": "github" + }, + "original": { + "owner": "insilica", + "repo": "nix-hdt-java", + "type": "github" + } + }, + "nixpkgs": { + "locked": { + "lastModified": 1704290814, + "narHash": "sha256-LWvKHp7kGxk/GEtlrGYV68qIvPHkU9iToomNFGagixU=", + "owner": "nixos", + "repo": "nixpkgs", + "rev": "70bdadeb94ffc8806c0570eb5c2695ad29f0e421", + "type": "github" + }, + "original": { + "owner": "nixos", + "ref": "nixos-23.05", + "repo": "nixpkgs", + "type": "github" + } + }, + "root": { + "inputs": { + "flake-utils": "flake-utils", + "hdt-cpp": "hdt-cpp", + "hdt-java": "hdt-java", + "nixpkgs": "nixpkgs" + } + }, + "systems": { + "locked": { + "lastModified": 1681028828, + "narHash": "sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768=", + "owner": "nix-systems", + "repo": "default", + "rev": "da67096a3b9bf56a91d16901293e51ba5b49a27e", + "type": "github" + }, + "original": { + "owner": "nix-systems", + "repo": "default", + "type": "github" + } + } + }, + "root": "root", + "version": 7 +} diff --git a/flake.nix b/flake.nix new file mode 100644 index 0000000..4e089d8 --- /dev/null +++ b/flake.nix @@ -0,0 +1,35 @@ +{ + description = "pubchem-annotations-kg"; + + inputs = { + nixpkgs.url = "github:nixos/nixpkgs/nixos-23.05"; + flake-utils.url = "github:numtide/flake-utils"; + hdt-cpp = { + url = "github:insilica/nix-hdt"; + inputs.flake-utils.follows = "flake-utils"; + inputs.nixpkgs.follows = "nixpkgs"; + }; + hdt-java = { + url = "github:insilica/nix-hdt-java"; + inputs.flake-utils.follows = "flake-utils"; + inputs.nixpkgs.follows = "nixpkgs"; + }; + }; + + outputs = { self, nixpkgs, flake-utils, hdt-cpp, hdt-java }: + flake-utils.lib.eachDefaultSystem (system: + with import nixpkgs { inherit system; }; { + devShells.default = mkShell { + buildInputs = [ + hdt-cpp.packages.${system}.default + hdt-java.packages.${system}.default + apache-jena + apache-jena-fuseki + jq + ]; + env = { + JENA_HOME = "${apache-jena}"; + }; + }; + }); +}