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Updates #1

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sjackman opened this issue Oct 10, 2017 · 4 comments
Open

Updates #1

sjackman opened this issue Oct 10, 2017 · 4 comments
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@sjackman
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@sjackman sjackman self-assigned this Oct 10, 2017
@sjackman
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sjackman commented Oct 23, 2017

Hackseq 2017 was most successful!
Here's an example of our ChromeQC report: https://hackseq.github.io/2017_project_6/report/
and our MultiQC report: https://hackseq.github.io/2017_project_6/multiqc/

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sjackman commented Mar 6, 2018

The ChromeQC web site has moved to https://bcgsc.github.io/chromeqc/
and the GitHub repo has moved here: https://github.com/bcgsc/chromeqc

@AmaliT
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AmaliT commented Apr 30, 2019

Hi @sjackman I am looking to test run this on the test dataset, however I can't seem to find the whitelist_barcodes.txt.gz. Could you please point me to this. Thanks in advance

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Fixed. Thanks for the bug report, Amali! I've fixed the issue in commit dd87e0c. Run make data/4M-with-alts-february-2016.txt to download https://raw.githubusercontent.com/10XGenomics/supernova/master/tenkit/lib/python/tenkit/barcodes/4M-with-alts-february-2016.txt

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