diff --git a/DESCRIPTION b/DESCRIPTION index 6ef04c3..50bd8f7 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: shinywqg Title: Water Quality Guideline Shiny App -Version: 0.1.0.9000 +Version: 0.1.1 Authors@R: c( person("Sebastian", "Dalgarno", , "seb@poissonconsulting.ca", "aut", comment = c(ORCID = "0000-0002-3658-4517")), person("Pearson", "Ayla", , "ayla@poissonconsulting.ca", c("aut", "cre"), comment = c(ORCID = "0000-0001-7388-1222")), @@ -31,12 +31,14 @@ Imports: rlang, stringr, webshot2, - chromote, + chromote (>= 0.3.1.9000), pagedown Suggests: testthat (>= 2.1.0), knitr, covr +Remotes: + rstudio/chromote URL: https://github.com/bcgov/shinywqg BugReports: https://github.com/bcgov/shinywqg/issues Encoding: UTF-8 diff --git a/NEWS.md b/NEWS.md index 9c12ecc..2ebcab1 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,5 +1,11 @@ +# shinywqg 0.1.1 (2025-01-20) + +- Updated internal data. +- Changed Salinity unites from ng/L to ppt (parts per thousand) in the user selection box. This was a labeling change for the variable and has no effect on the guideline generated. +- Added minimum version requirement for the `chromote` package due to issue with random port connection. + # shinywqg 0.1.0.9000 (2024-11-26) - Package maintenance. diff --git a/R/sysdata.rda b/R/sysdata.rda index f57499a..43f825e 100644 Binary files a/R/sysdata.rda and b/R/sysdata.rda differ diff --git a/data-raw/codes.csv b/data-raw/codes.csv index d8a921b..5b47d9b 100644 --- a/data-raw/codes.csv +++ b/data-raw/codes.csv @@ -1,89 +1,89 @@ -Variable,EMS_Code,Units -Colour Apparent,EMS_0001,Col.unit -Colour True,EMS_0002,Col.unit -pH,EMS_0004,pH -Dissolved Solids (Filterable Residue),EMS_0007,mg/L -Conductivity Specific,EMS_0011,uS/cm -Temperature,EMS_0013,degC -Temperature - Field,EMS_TEMF,degC -Oxygen Dissolved,EMS_0014,mg/L -Turbidity,EMS_0015,NTU -Extinction Depth,EMS_0019,m -Alkalinity Total 4.5,EMS_0102,mg/L -Organic Carbon Total,EMS_0103,mg/L -Chloride Total,EMS_0104,mg/L -Fluoride Total,EMS_0106,mg/L -Hardness Total,EMS_0107,mg/L -Nitrate Nitrite,EMS_0109,mg/L -Nitrite Dissolved Total,EMS_0111,mg/L -Nitrogen Total,EMS_0114,mg/L -Biochemical Oxygen Demand,EMS_0115,mg/L -Salinity,EMS_0130,ng/L -Chlorophyll A,EMS_0143,mg/L -Escherichia coli,EMS_0147,CFU/100mL -Enterococci,EMS_0148,CFU/100mL -Coliforms Fecal,EMS_0450,CFU/100mL -Cyanide Dissolved,EMS_1105,ug/L -Fluoride Dissolved,EMS_1106,mg/L -Hardness Dissolved,EMS_1107,mg/L -Ammonia Dissolved,EMS_1108,mg/L -Nitrate Nitrite Dissolved,EMS_1109,mg/L -Nitrogen Dissolved,EMS_1114,mg/L -Phosphorus Ortho,EMS_1118,mg/L -Sulphate Dissolved,EMS_1121,mg/L -Dissolved Organic Carbon,EMS_1103,mg/L -Atrazine,EMS_A016,mg/L -Silver Dissolved,EMS_AG_D,ug/L -Alkalinity Total,EMS_AK_T,mg/L -Aluminum Total,EMS_AL_T,mg/L -Arsenic Dissolved,EMS_AS_D,ug/L -Boron Dissolved,EMS_B__D,mg/L -Dichlorobromomethane (Bromodichloromethane),EMS_B002,ug/L -Tribromomethane (Bromoform),EMS_B013,ug/L -"1,2-Dichlorobenzene",EMS_B022,ug/L -Barium Dissolved,EMS_BA_D,ug/L -Vinyl Chloride,EMS_C004,mg/L -"1,2-Dichloroethane",EMS_C022,ug/L -"1,1-Dichloroethylene",EMS_C024,mg/L -Carbon Tetrachloride,EMS_C034,mg/L -Calcium Dissolved,EMS_CA_D,mg/L -Cadmium Total,EMS_CD_T,ug/L -Chlorate Dissolved,EMS_CL03,mg/L -Chlorite Dissolved,EMS_CLO_,mg/L -Cyanide Total,EMS_CN_T,ug/L -Cobalt Dissolved,EMS_CO_D,ug/L -Chromium Dissolved,EMS_CR_D,ug/L -Chromium Total,EMS_CR_T,ug/L -Copper Dissolved,EMS_CU_D,ug/L -Copper Total,EMS_CU_T,ug/L -"Chlorophenol, DCP",EMS_D060,mg/L -Alkalinity pH 4.5/4.2,EMS_D102,mg/L -Oxygen Dissolved Field,EMS_DO_F,mg/L -Hexachlorobenzene,EMS_H003,ug/L -Mercury Dissolved,EMS_HG_D,ug/L -Mercury Methyl,EMS_HGME,ug/L -Lithium Total,EMS_LI_T,mg/L -Manganese Dissolved,EMS_MN_D,mg/L -Molybdenum Dissolved,EMS_MO_D,mg/L -Naphthalene D8,EMS_NAPH,ug/L -Nickel Dissolved,EMS_NI_D,ug/L -Nitrate Soluble,EMS_NO3_,mg/L -Phosphorus Dissolved,EMS_P__D,mg/L -Phosphorus Total,EMS_P__T,mg/L -Chrysene,EMS_PA09,ug/L -Polycyclic Aromatic Hydrocarbons (Carcinogenic) Total,EMS_PAH_,mg/L -Lead Dissolved,EMS_PB_D,ug/L -Pseudomonas Aeruginosa,EMS_PSEU,CFU/100mL -Conductivity Specific - Field,EMS_SC_F,uS/cm -Selenium Dissolved,EMS_SE_D,ug/L -Strontium Total,EMS_SR_T,mg/L -"Chlorophenol, TTCP",EMS_T020,mg/L -"Chlorophenol, TCP",EMS_T021,mg/L -Trichloroethylene,EMS_T029,mg/L -Tetrachloroethylene,EMS_T030,mg/L -Thallium Dissolved,EMS_TL_D,ug/L -"Tin, Tributyltin",EMS_TRSN,mg/L -Turbidity - Field,EMS_TURF,NTU -Uranium Dissolved,EMS_U__D,ug/L -Vanadium Total,EMS_V__T,mg/L -Zinc Dissolved,EMS_ZN_D,ug/L +Variable,EMS_Code,Units +Colour Apparent,EMS_0001,Col.unit +Colour True,EMS_0002,Col.unit +pH,EMS_0004,pH +Dissolved Solids (Filterable Residue),EMS_0007,mg/L +Conductivity Specific,EMS_0011,uS/cm +Temperature,EMS_0013,degC +Temperature - Field,EMS_TEMF,degC +Oxygen Dissolved,EMS_0014,mg/L +Turbidity,EMS_0015,NTU +Extinction Depth,EMS_0019,m +Alkalinity Total 4.5,EMS_0102,mg/L +Organic Carbon Total,EMS_0103,mg/L +Chloride Total,EMS_0104,mg/L +Fluoride Total,EMS_0106,mg/L +Hardness Total,EMS_0107,mg/L +Nitrate Nitrite,EMS_0109,mg/L +Nitrite Dissolved Total,EMS_0111,mg/L +Nitrogen Total,EMS_0114,mg/L +Biochemical Oxygen Demand,EMS_0115,mg/L +Salinity,EMS_0130,ppt +Chlorophyll A,EMS_0143,mg/L +Escherichia coli,EMS_0147,CFU/100mL +Enterococci,EMS_0148,CFU/100mL +Coliforms Fecal,EMS_0450,CFU/100mL +Cyanide Dissolved,EMS_1105,ug/L +Fluoride Dissolved,EMS_1106,mg/L +Hardness Dissolved,EMS_1107,mg/L +Ammonia Dissolved,EMS_1108,mg/L +Nitrate Nitrite Dissolved,EMS_1109,mg/L +Nitrogen Dissolved,EMS_1114,mg/L +Phosphorus Ortho,EMS_1118,mg/L +Sulphate Dissolved,EMS_1121,mg/L +Dissolved Organic Carbon,EMS_1103,mg/L +Atrazine,EMS_A016,mg/L +Silver Dissolved,EMS_AG_D,ug/L +Alkalinity Total,EMS_AK_T,mg/L +Aluminum Total,EMS_AL_T,mg/L +Arsenic Dissolved,EMS_AS_D,ug/L +Boron Dissolved,EMS_B__D,mg/L +Dichlorobromomethane (Bromodichloromethane),EMS_B002,ug/L +Tribromomethane (Bromoform),EMS_B013,ug/L +"1,2-Dichlorobenzene",EMS_B022,ug/L +Barium Dissolved,EMS_BA_D,ug/L +Vinyl Chloride,EMS_C004,mg/L +"1,2-Dichloroethane",EMS_C022,ug/L +"1,1-Dichloroethylene",EMS_C024,mg/L +Carbon Tetrachloride,EMS_C034,mg/L +Calcium Dissolved,EMS_CA_D,mg/L +Cadmium Total,EMS_CD_T,ug/L +Chlorate Dissolved,EMS_CL03,mg/L +Chlorite Dissolved,EMS_CLO_,mg/L +Cyanide Total,EMS_CN_T,ug/L +Cobalt Dissolved,EMS_CO_D,ug/L +Chromium Dissolved,EMS_CR_D,ug/L +Chromium Total,EMS_CR_T,ug/L +Copper Dissolved,EMS_CU_D,ug/L +Copper Total,EMS_CU_T,ug/L +"Chlorophenol, DCP",EMS_D060,mg/L +Alkalinity pH 4.5/4.2,EMS_D102,mg/L +Oxygen Dissolved Field,EMS_DO_F,mg/L +Hexachlorobenzene,EMS_H003,ug/L +Mercury Dissolved,EMS_HG_D,ug/L +Mercury Methyl,EMS_HGME,ug/L +Lithium Total,EMS_LI_T,mg/L +Manganese Dissolved,EMS_MN_D,mg/L +Molybdenum Dissolved,EMS_MO_D,mg/L +Naphthalene D8,EMS_NAPH,ug/L +Nickel Dissolved,EMS_NI_D,ug/L +Nitrate Soluble,EMS_NO3_,mg/L +Phosphorus Dissolved,EMS_P__D,mg/L +Phosphorus Total,EMS_P__T,mg/L +Chrysene,EMS_PA09,ug/L +Polycyclic Aromatic Hydrocarbons (Carcinogenic) Total,EMS_PAH_,mg/L +Lead Dissolved,EMS_PB_D,ug/L +Pseudomonas Aeruginosa,EMS_PSEU,CFU/100mL +Conductivity Specific - Field,EMS_SC_F,uS/cm +Selenium Dissolved,EMS_SE_D,ug/L +Strontium Total,EMS_SR_T,mg/L +"Chlorophenol, TTCP",EMS_T020,mg/L +"Chlorophenol, TCP",EMS_T021,mg/L +Trichloroethylene,EMS_T029,mg/L +Tetrachloroethylene,EMS_T030,mg/L +Thallium Dissolved,EMS_TL_D,ug/L +"Tin, Tributyltin",EMS_TRSN,mg/L +Turbidity - Field,EMS_TURF,NTU +Uranium Dissolved,EMS_U__D,ug/L +Vanadium Total,EMS_V__T,mg/L +Zinc Dissolved,EMS_ZN_D,ug/L \ No newline at end of file