diff --git a/.gitignore b/.gitignore index 49f7a03..86f3290 100644 --- a/.gitignore +++ b/.gitignore @@ -164,6 +164,7 @@ junk.txt data/** data_prep/junk.py data_prep/docker_data/** -data_prep/poetry.toml - +data_prep/docker_venv/** +data_prep/data/** +data_prep/.venv/** sync/src/junk.py diff --git a/.vscode/launch.json b/.vscode/launch.json index 7df6b03..c041a52 100644 --- a/.vscode/launch.json +++ b/.vscode/launch.json @@ -67,6 +67,17 @@ "PROD" ] }, + { + "name": "oracle-extract-test", + "type": "python", + "request": "launch", + "program": "${workspaceFolder}/data_prep/main_ora_extract.py", + "console": "integratedTerminal", + "envFile": "${workspaceFolder}/.env", + "args": [ + "TEST" + ] + }, { "name": "oracle-ingest-test", "type": "python", diff --git a/Dockerfile.ora_ingest b/Dockerfile.ora_ingest new file mode 100644 index 0000000..11f287c --- /dev/null +++ b/Dockerfile.ora_ingest @@ -0,0 +1,62 @@ +# ----------------- STAGE 1 ----------------- + FROM python:3.13-slim-bookworm as base + # using slim for development as the wheels are not always compat with + # alpine, and builds can be slow as a result + # FROM python:3.12-slim as base + + ARG DEV=false + ENV VIRTUAL_ENV=/app/docker_venv \ + PATH="/app/docker_venv/bin:$PATH" + + # ----------------- STAGE 2 ----------------- + FROM base as builder + WORKDIR /app + + # Mostly config for poetry + # - disable prompting + # - disable virtualenv creation + # - specify the path to the venv + ENV POETRY_NO_INTERACTION=1 \ + POETRY_VIRTUALENVS_IN_PROJECT=0 \ + POETRY_VIRTUALENVS_CREATE=0 \ + POETRY_CACHE_DIR=/tmp/poetry_cache \ + VIRTUAL_ENV=/app/docker_venv \ + PATH="/app/docker_venv/bin:$PATH" + + # install build tools, and dev libs required to compile postgres stuff + # ideally these are not going to be used as for most of the libs + # there are wheels available, however they are available in case we + # need to compile something + RUN apt update && \ + apt install -y --no-install-recommends gcc libpq-dev python3-dev && \ + useradd -M nonroot + + # Install Poetry to global python env + RUN pip install poetry==1.8.4 + + # Grab the app dependency declarations + COPY ./data_prep/pyproject.toml ./data_prep/poetry.lock /app/ + + # create the venv in $VIRTUAL_ENV so we can control where it is being created + # unfortunately this is the only way that we can control the venv that + # poetry will use, is to create it ourselves + RUN python -m venv $VIRTUAL_ENV; . $VIRTUAL_ENV/bin/activate + + # have created and activated the venv, now install the dependencies into it + RUN poetry install --without dev --no-root -v && rm -rf $POETRY_CACHE_DIR + + # ----------------- STAGE 3 ----------------- + FROM base as runtime + WORKDIR /app + + # install the postgres client, required by psycopg2 + RUN apt update && apt install -y --no-install-recommends postgresql-client + + # only copy over the venv from the builder stage + COPY --from=builder ${VIRTUAL_ENV} ${VIRTUAL_ENV} + + # RUN apk add bash + COPY data_prep/db_env_utils/ /app/db_env_utils/ + COPY docker-compose.yml /app/ + + CMD ["python", "db_env_utils/main_ora_ingest.py", "TEST"] diff --git a/Dockerfile.pg_ingest b/Dockerfile.pg_ingest new file mode 100644 index 0000000..2eb5cc5 --- /dev/null +++ b/Dockerfile.pg_ingest @@ -0,0 +1,66 @@ +# ----------------- STAGE 1 ----------------- +# NEEDS the docker-compose file to retrieve the local database connection +# information. To be able to include the docker-compose in the build this +# dockerfile needs to be located in the parent directory of the docker-compose +FROM python:3.13-slim-bookworm as base +# using slim for development as the wheels are not always compat with +# alpine, and builds can be slow as a result +# FROM python:3.12-slim as base + +ARG DEV=false +ENV VIRTUAL_ENV=/app/docker_venv \ + PATH="/app/docker_venv/bin:$PATH" + +# ----------------- STAGE 2 ----------------- +FROM base as builder +WORKDIR /app + +# Mostly config for poetry +# - disable prompting +# - disable virtualenv creation +# - specify the path to the venv +ENV POETRY_NO_INTERACTION=1 \ + POETRY_VIRTUALENVS_IN_PROJECT=0 \ + POETRY_VIRTUALENVS_CREATE=0 \ + POETRY_CACHE_DIR=/tmp/poetry_cache \ + VIRTUAL_ENV=/app/docker_venv \ + PATH="/app/docker_venv/bin:$PATH" + +# install build tools, and dev libs required to compile postgres stuff +# ideally these are not going to be used as for most of the libs +# there are wheels available, however they are available in case we +# need to compile something +RUN apt update && \ + apt install -y --no-install-recommends gcc libpq-dev python3-dev && \ + useradd -M nonroot + +# Install Poetry to global python env +RUN pip install poetry==1.8.4 + +# Grab the app dependency declarations +COPY ./data_prep/pyproject.toml data_prep/poetry.lock /app/ + +# create the venv in $VIRTUAL_ENV so we can control where it is being created +# unfortunately this is the only way that we can control the venv that +# poetry will use, is to create it ourselves +RUN python -m venv $VIRTUAL_ENV; . $VIRTUAL_ENV/bin/activate + +# have created and activated the venv, now install the dependencies into it +RUN poetry install --without dev --no-root -v && rm -rf $POETRY_CACHE_DIR + +# ----------------- STAGE 3 ----------------- +FROM base as runtime +WORKDIR /app + + +# install the postgres client, required by psycopg2 +RUN apt update && apt install -y --no-install-recommends postgresql-client + +# only copy over the venv from the builder stage +COPY --from=builder ${VIRTUAL_ENV} ${VIRTUAL_ENV} + +# RUN apk add bash +COPY data_prep/db_env_utils/ /app/db_env_utils/ +COPY docker-compose.yml /app/ + +CMD ["python", "db_env_utils/main_spar_ingest.py", "TEST"] diff --git a/data_prep/docker-compose.yml b/data_prep/db_env_utils/__init__.py similarity index 100% rename from data_prep/docker-compose.yml rename to data_prep/db_env_utils/__init__.py diff --git a/data_prep/async_loader.py b/data_prep/db_env_utils/async_loader.py similarity index 100% rename from data_prep/async_loader.py rename to data_prep/db_env_utils/async_loader.py diff --git a/data_prep/constants.py b/data_prep/db_env_utils/constants.py similarity index 100% rename from data_prep/constants.py rename to data_prep/db_env_utils/constants.py diff --git a/data_prep/db_lib.py b/data_prep/db_env_utils/db_lib.py similarity index 100% rename from data_prep/db_lib.py rename to data_prep/db_env_utils/db_lib.py diff --git a/data_prep/docker_parser.py b/data_prep/db_env_utils/docker_parser.py similarity index 62% rename from data_prep/docker_parser.py rename to data_prep/db_env_utils/docker_parser.py index d066e3b..0fb196c 100644 --- a/data_prep/docker_parser.py +++ b/data_prep/db_env_utils/docker_parser.py @@ -40,14 +40,81 @@ def __init__(self, compose_file_path: str | None = None) -> None: that the script was executed from. :type compose_file_path: str, path """ - self.compose_file_path = compose_file_path - if self.compose_file_path is None: - self.compose_file_path = "./docker-compose.yml" + self.compose_file_path = self.get_composefile_path(compose_file_path) with pathlib.Path(self.compose_file_path).open("r") as fh: self.docker_comp = yaml.safe_load(fh) + def get_composefile_path(self, comp_file_path: str) -> str: + """ + Return the path to the docker-compose file. + + Expects the docker compose file to exist in either the current working + or back a single directory relative to this script. + + :return: the path to the docker-compose file + :rtype: str + """ + if not comp_file_path: + docker_comp_file_path = pathlib.Path( + "./docker-compose.yml" + ).resolve() + else: + docker_comp_file_path = pathlib.Path(comp_file_path) + + if not docker_comp_file_path.exists(): + LOGGER.debug( + "1. docker compose file does not exist: %s", + docker_comp_file_path, + ) + + # try to find the docker-compose file one file back from this files + # path + docker_comp_file_path = ( + pathlib.Path(__file__) + .parent.joinpath("..", "docker-compose.yml") + .resolve() + ) + + if not docker_comp_file_path.exists(): + LOGGER.debug( + "2. docker compose file does not exist: %s", + docker_comp_file_path, + ) + # try going back one more directory + docker_comp_file_path = ( + pathlib.Path(__file__) + .parent.joinpath("..", "..", "docker-compose.yml") + .resolve() + ) + if not docker_comp_file_path.exists(): + LOGGER.debug( + "3. docker compose file does not exist: %s", + docker_comp_file_path, + ) + + # try going back one more directory + docker_comp_file_path = ( + pathlib.Path(__file__) + .parent.joinpath( + "..", + "..", + "..", + "docker-compose.yml", + ) + .resolve() + ) + + if not docker_comp_file_path.exists(): + raise FileNotFoundError( + "Could not find the docker-compose file in the current or parent directory, %s", + docker_comp_file_path, + ) + + LOGGER.info(f"Using docker-compose file: {docker_comp_file_path}") + return docker_comp_file_path + def get_spar_conn_params(self) -> env_config.ConnectionParameters: """ Return postgres connection parameters. diff --git a/data_prep/env_config.py b/data_prep/db_env_utils/env_config.py similarity index 100% rename from data_prep/env_config.py rename to data_prep/db_env_utils/env_config.py diff --git a/data_prep/kubernetes_wrapper.py b/data_prep/db_env_utils/kubernetes_wrapper.py similarity index 100% rename from data_prep/kubernetes_wrapper.py rename to data_prep/db_env_utils/kubernetes_wrapper.py diff --git a/data_prep/logging.config b/data_prep/db_env_utils/logging.config similarity index 100% rename from data_prep/logging.config rename to data_prep/db_env_utils/logging.config diff --git a/data_prep/main_common.py b/data_prep/db_env_utils/main_common.py similarity index 99% rename from data_prep/main_common.py rename to data_prep/db_env_utils/main_common.py index 7d265b0..e060095 100644 --- a/data_prep/main_common.py +++ b/data_prep/db_env_utils/main_common.py @@ -36,8 +36,8 @@ def __init__(self, env_str: str, db: constants.DBType) -> None: self.curdir = pathlib.Path(__file__).parents[0] self.datadir = pathlib.Path( constants.DATA_DIR, - self.env_str, - db.name.lower(), + self.env_str.upper(), + db.name.upper(), ) self.db_type = db self.kube_client = None diff --git a/data_prep/main_ora_extract.py b/data_prep/db_env_utils/main_ora_extract.py similarity index 100% rename from data_prep/main_ora_extract.py rename to data_prep/db_env_utils/main_ora_extract.py diff --git a/data_prep/main_ora_ingest.py b/data_prep/db_env_utils/main_ora_ingest.py similarity index 100% rename from data_prep/main_ora_ingest.py rename to data_prep/db_env_utils/main_ora_ingest.py diff --git a/data_prep/main_spar_extract.py b/data_prep/db_env_utils/main_spar_extract.py similarity index 100% rename from data_prep/main_spar_extract.py rename to data_prep/db_env_utils/main_spar_extract.py diff --git a/data_prep/main_spar_ingest.py b/data_prep/db_env_utils/main_spar_ingest.py similarity index 100% rename from data_prep/main_spar_ingest.py rename to data_prep/db_env_utils/main_spar_ingest.py diff --git a/data_prep/object_store.py b/data_prep/db_env_utils/object_store.py similarity index 100% rename from data_prep/object_store.py rename to data_prep/db_env_utils/object_store.py diff --git a/data_prep/oradb_lib.py b/data_prep/db_env_utils/oradb_lib.py similarity index 100% rename from data_prep/oradb_lib.py rename to data_prep/db_env_utils/oradb_lib.py diff --git a/data_prep/postgresdb_lib.py b/data_prep/db_env_utils/postgresdb_lib.py similarity index 100% rename from data_prep/postgresdb_lib.py rename to data_prep/db_env_utils/postgresdb_lib.py diff --git a/data_prep/docker_run_ORA_TEST.sh b/data_prep/docker_run_ORA_TEST.sh deleted file mode 100755 index 1d68d39..0000000 --- a/data_prep/docker_run_ORA_TEST.sh +++ /dev/null @@ -1,18 +0,0 @@ -#!/bin/sh - -# Install poetry and load virtual env -echo "install poetry" -python3 -m pip install poetry -cd /application - -# configure poetry cache directory and virtualenvs path -export POETRY_CACHE_DIR=/application/docker_data/poetry_cache -export POETRY_VIRTUALENVS_PATH=/application/docker_data/poetry_venvs - -poetry install -. $(poetry env info --path)/bin/activate - -# Run script -echo "run the data ingestion" -python3 ./main_ora_ingest.py TEST - diff --git a/data_prep/docker_run_SPAR_TEST.sh b/data_prep/docker_run_SPAR_TEST.sh deleted file mode 100755 index 26d7194..0000000 --- a/data_prep/docker_run_SPAR_TEST.sh +++ /dev/null @@ -1,24 +0,0 @@ -#!/bin/sh - -# Wrapper script to initiate the data load -apt update && apt install -y postgresql-common gnupg gnupg2 gnupg1 - -# Requires postgresql-common -/usr/share/postgresql-common/pgdg/apt.postgresql.org.sh -y && \ - apt install -y postgresql-client-15 - -# Install poetry and load virtual env -# - configure poetry cache directory and virtualenvs path, so can be re-used -export POETRY_CACHE_DIR=/application/docker_data/poetry_cache -export POETRY_VIRTUALENVS_PATH=/application/docker_data/poetry_venvs - -echo "install poetry" -python3 -m pip install poetry -cd /application -poetry config virtualenvs.create false --local -poetry install -. $(poetry env info --path)/bin/activate -echo "run the data ingestion" - -# Run script -python3 ./main_spar_ingest.py TEST diff --git a/migrations_ora/remove_pk_indexes.py b/data_prep/migrations_ora/remove_pk_indexes.py similarity index 100% rename from migrations_ora/remove_pk_indexes.py rename to data_prep/migrations_ora/remove_pk_indexes.py diff --git a/migrations_ora/sql/V1.0.0__first_migration.sql b/data_prep/migrations_ora/sql/V1.0.0__first_migration.sql similarity index 100% rename from migrations_ora/sql/V1.0.0__first_migration.sql rename to data_prep/migrations_ora/sql/V1.0.0__first_migration.sql diff --git a/migrations_ora/sql/V1.2.0__seedlot_table_dependencies.sql b/data_prep/migrations_ora/sql/V1.2.0__seedlot_table_dependencies.sql similarity index 100% rename from migrations_ora/sql/V1.2.0__seedlot_table_dependencies.sql rename to data_prep/migrations_ora/sql/V1.2.0__seedlot_table_dependencies.sql diff --git a/migrations_ora/sql/V1.3.0__seedlot_genetic_worth.sql b/data_prep/migrations_ora/sql/V1.3.0__seedlot_genetic_worth.sql similarity index 100% rename from migrations_ora/sql/V1.3.0__seedlot_genetic_worth.sql rename to data_prep/migrations_ora/sql/V1.3.0__seedlot_genetic_worth.sql diff --git a/migrations_ora/sql/V1.4.0__seedlot_owner_quantity.sql b/data_prep/migrations_ora/sql/V1.4.0__seedlot_owner_quantity.sql similarity index 100% rename from migrations_ora/sql/V1.4.0__seedlot_owner_quantity.sql rename to data_prep/migrations_ora/sql/V1.4.0__seedlot_owner_quantity.sql diff --git a/migrations_ora/sql/V1.5.0__parent_tree.sql b/data_prep/migrations_ora/sql/V1.5.0__parent_tree.sql similarity index 100% rename from migrations_ora/sql/V1.5.0__parent_tree.sql rename to data_prep/migrations_ora/sql/V1.5.0__parent_tree.sql diff --git a/migrations_ora/sql/V1.6.0__seedlot_plan_zone.sql b/data_prep/migrations_ora/sql/V1.6.0__seedlot_plan_zone.sql similarity index 100% rename from migrations_ora/sql/V1.6.0__seedlot_plan_zone.sql rename to data_prep/migrations_ora/sql/V1.6.0__seedlot_plan_zone.sql diff --git a/migrations_ora/sql/V1.7.0__seedlot_smp.sql b/data_prep/migrations_ora/sql/V1.7.0__seedlot_smp.sql similarity index 100% rename from migrations_ora/sql/V1.7.0__seedlot_smp.sql rename to data_prep/migrations_ora/sql/V1.7.0__seedlot_smp.sql diff --git a/migrations_ora/sql/V1.8.0__seed_plan_zone.sql b/data_prep/migrations_ora/sql/V1.8.0__seed_plan_zone.sql similarity index 100% rename from migrations_ora/sql/V1.8.0__seed_plan_zone.sql rename to data_prep/migrations_ora/sql/V1.8.0__seed_plan_zone.sql diff --git a/oradb/Dockerfile b/data_prep/oradb_demo/Dockerfile similarity index 100% rename from oradb/Dockerfile rename to data_prep/oradb_demo/Dockerfile diff --git a/data_prep/oradb_demo/README.md b/data_prep/oradb_demo/README.md new file mode 100644 index 0000000..53f082f --- /dev/null +++ b/data_prep/oradb_demo/README.md @@ -0,0 +1,2 @@ +Demo code to help get started with working with oracle in a container. + diff --git a/oradb/db_init/db_init.sql b/data_prep/oradb_demo/db_init/db_init.sql similarity index 100% rename from oradb/db_init/db_init.sql rename to data_prep/oradb_demo/db_init/db_init.sql diff --git a/oradb/init_scripts/1_create_users.sql 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based protocol implementation" +optional = false +python-versions = ">=3.7.0" +files = [ + {file = "wsproto-1.2.0-py3-none-any.whl", hash = "sha256:b9acddd652b585d75b20477888c56642fdade28bdfd3579aa24a4d2c037dd736"}, + {file = "wsproto-1.2.0.tar.gz", hash = "sha256:ad565f26ecb92588a3e43bc3d96164de84cd9902482b130d0ddbaa9664a85065"}, +] + +[package.dependencies] +h11 = ">=0.9.0,<1" + +[metadata] +lock-version = "2.0" +python-versions = "^3.11" +content-hash = "62c50d91d13e0bd13f8c6d33bac57d7f2104ed58d1e573620088c6a4b965a386" diff --git a/data_prep/poetry.toml b/data_prep/poetry.toml new file mode 100644 index 0000000..a86e6e0 --- /dev/null +++ b/data_prep/poetry.toml @@ -0,0 +1,4 @@ +[virtualenvs] +create = true +path = '.venv' +in-project = true \ No newline at end of file diff --git a/data_prep/pyproject.toml b/data_prep/pyproject.toml old mode 100755 new mode 100644 index e69de29..6a0108e --- a/data_prep/pyproject.toml +++ b/data_prep/pyproject.toml @@ -0,0 +1,56 @@ +[tool.poetry] +name = "data_prep" +version = "0.1.0" +description = "code used to extract and load data to local dev env" +authors = ["Your Name "] +license = "Apache License 2.0" +readme = "README.md" +package-mode = false + +[tool.poetry.dependencies] +python = "^3.11" +oracledb = "^2.4.1" +numpy = "^2.1.1" +SQLAlchemy = "^2.0.35" +PyYAML = "^6.0.2" +pandas = "^2.2.3" +pyarrow = "^18.0.0" +pypika = "^0.48.9" +boto3 = {extras = ["s3"], version = "^1.35.37"} +kubernetes = "^31.0.0" +requests = "^2.32.3" +openshift-client = "^2.0.4" +kr8s = "^0.18.0" + +psycopg2-binary = "^2.9.10" +[tool.poetry.group.dev.dependencies] +black = "^24.8.0" +ruff = "^0.8.0" +mypy-boto3 = "^1.35.38" + +pytest = "^8.3.3" +[build-system] +requires = ["poetry-core"] +build-backend = "poetry.core.masonry.api" + +[tool.ruff.lint] +select = ["ALL"] + +[tool.ruff] +line-length = 80 + +[tool.black] +line-length = 80 + +# Ignore some errors in tests as they are not relevant +[tool.ruff.lint.extend-per-file-ignores] +"**/tests/**/*.py" = [ + # at least this three should be fine in tests: + "S101", # asserts allowed in tests... + "S105", # local dev password fields are verified + "ARG", # Unused function args -> fixtures nevertheless are functionally relevant... + "FBT", # Don't care about booleans as positional arguments in tests, e.g. via @pytest.mark.parametrize() + # The below are debateable + "PLR2004", # Magic value used in comparison, ... + "S311", # Standard pseudo-random generators are not suitable for cryptographic purposes +] diff --git a/common/init_db/init.sql b/data_prep/tests/init.sql similarity index 97% rename from common/init_db/init.sql rename to data_prep/tests/init.sql index 5cd45fe..fd5bc4c 100644 --- a/common/init_db/init.sql +++ b/data_prep/tests/init.sql @@ -1,3 +1,9 @@ +/* +Not currently in use... but may be useful in the future. + +Contains sample code that could be used for test cases. +*/ + CREATE EXTENSION postgis; CREATE database spar; @@ -1493,14 +1499,14 @@ create table spar.seedlot_genetic_worth ( genetic_worth_code varchar(3) not null, genetic_quality_value decimal(4, 1) not null, tested_parent_tree_cont_pct decimal(6, 2), - entry_userid varchar(30) not null, - entry_timestamp timestamp not null, - update_userid varchar(30) not null, - update_timestamp timestamp not null, + entry_userid varchar(30) not null, + entry_timestamp timestamp not null, + update_userid varchar(30) not null, + update_timestamp timestamp not null, revision_count int not null, - constraint seedlot_genetic_worth_pk + constraint seedlot_genetic_worth_pk primary key(seedlot_number, genetic_worth_code), - constraint seedlot_genet_worth_seedlot_fk + constraint seedlot_genet_worth_seedlot_fk foreign key(seedlot_number) references spar.seedlot(seedlot_number) ); @@ -1534,9 +1540,9 @@ create table spar.seedlot_parent_tree ( update_userid varchar(30) not null, update_timestamp timestamp not null, revision_count int not null, - constraint seedlot_parent_tree_pk + constraint seedlot_parent_tree_pk primary key(seedlot_number, parent_tree_id), - constraint seedlot_parent_tree_seedlot_fk + constraint seedlot_parent_tree_seedlot_fk foreign key(seedlot_number) references spar.seedlot(seedlot_number) ); @@ -1562,16 +1568,16 @@ create table spar.seedlot_parent_tree_gen_qlty ( genetic_type_code varchar(2) not null, genetic_worth_code varchar(3) not null, genetic_quality_value decimal(4, 1) not null, - estimated_ind boolean, - untested_ind boolean, + estimated_ind boolean, + untested_ind boolean, entry_userid varchar(30) not null, entry_timestamp timestamp not null, update_userid varchar(30) not null, update_timestamp timestamp not null, revision_count int, - constraint seedlot_parent_tree_gen_qlt_pk + constraint seedlot_parent_tree_gen_qlt_pk primary key(seedlot_number, parent_tree_id, genetic_type_code, genetic_worth_code), - constraint sl_ptree_genqly_sl_ptree_fk + constraint sl_ptree_genqly_sl_ptree_fk foreign key(seedlot_number, parent_tree_id) references spar.seedlot_parent_tree(seedlot_number, parent_tree_id) ); @@ -1600,9 +1606,9 @@ create table spar.seedlot_parent_tree_smp_mix ( update_userid varchar(30) not null, update_timestamp timestamp not null, revision_count int not null, - constraint seedlot_parent_tree_smp_mix_pk + constraint seedlot_parent_tree_smp_mix_pk primary key(seedlot_number, parent_tree_id, genetic_type_code, genetic_worth_code), - constraint sl_ptree_smp_mix_sl_ptree_fk + constraint sl_ptree_smp_mix_sl_ptree_fk foreign key(seedlot_number, parent_tree_id) references spar.seedlot_parent_tree(seedlot_number, parent_tree_id) ); @@ -1628,14 +1634,14 @@ create table spar.smp_mix ( parent_tree_number varchar(5) not null, amount_of_material int not null, proportion decimal(20,10), - entry_userid varchar(30) not null, - entry_timestamp timestamp not null, - update_userid varchar(30) not null, - update_timestamp timestamp not null, + entry_userid varchar(30) not null, + entry_timestamp timestamp not null, + update_userid varchar(30) not null, + update_timestamp timestamp not null, revision_count int not null, - constraint smp_mix_pk + constraint smp_mix_pk primary key(seedlot_number, parent_tree_id), - constraint smp_mix_seedlot_fk + constraint smp_mix_seedlot_fk foreign key(seedlot_number) references spar.seedlot(seedlot_number) ); @@ -1658,15 +1664,15 @@ create table spar.smp_mix_gen_qlty ( genetic_type_code varchar(2) not null, genetic_worth_code varchar(3) not null, genetic_quality_value decimal(4, 1) not null, - estimated_ind boolean, + estimated_ind boolean, entry_userid varchar(30) not null, entry_timestamp timestamp not null, update_userid varchar(30) not null, update_timestamp timestamp not null, revision_count int not null, - constraint smp_mix_gen_qlty_pk + constraint smp_mix_gen_qlty_pk primary key(seedlot_number, parent_tree_id, genetic_type_code, genetic_worth_code), - constraint smp_mix_gen_qlty_smp_mix_pk + constraint smp_mix_gen_qlty_smp_mix_pk foreign key(seedlot_number, parent_tree_id) references spar.smp_mix(seedlot_number, parent_tree_id) ); @@ -1778,14 +1784,14 @@ comment on column spar.seedlot.smp_mean_bv_growth is 'The breeding value for the comment on column spar.seedlot.area_of_use_comment is 'Comments on Seedlot area of use.'; create table spar.seedlot_seed_plan_zone ( - seedlot_number varchar(5) not null, - seed_plan_zone_code varchar(3) not null, - entry_userid varchar(30) not null, + seedlot_number varchar(5) not null, + seed_plan_zone_code varchar(3) not null, + entry_userid varchar(30) not null, entry_timestamp timestamp not null, update_userid varchar(30) not null, update_timestamp timestamp not null, revision_count int not null, - constraint seedlot_seed_plan_zone_pk + constraint seedlot_seed_plan_zone_pk primary key(seedlot_number, seed_plan_zone_code), constraint seedlot_seedplan_zn_seedlot_fk foreign key(seedlot_number) references spar.seedlot(seedlot_number) @@ -2023,7 +2029,7 @@ create table if not exists spar.seedlot_audit ( comment on column spar.seedlot_audit.seedlot_audit_id is 'Serial Incremental number referring to a unique primary key for this table'; -comment on column spar.seedlot_audit.audit_date is 'Date when this audit record was created (representing with some precision when the statement was executed)'; +comment on column spar.seedlot_audit.audit_date is 'Date when this audit record was created (representing with some precision when the statement was executed)'; comment on column spar.seedlot_audit.spar_audit_code is 'Type of statement executed in spar.seedlot table: I=INSERT, U=UPDATE, D=DELETE. Note that DELETE record represents only the latest data whiped out from the seedlot table'; comment on column spar.seedlot_audit.db_user is 'Postgres database user who executed the statement in spar.seedlot table'; comment on column spar.seedlot_audit.audit_revision_version is 'Record registered version for audit purposes.'; @@ -2077,7 +2083,7 @@ comment on column spar.seedlot_audit.entry_userid is 'Referrin comment on column spar.seedlot_audit.entry_timestamp is 'Referring value for spar.seedlot.entry_timestamp column'; comment on column spar.seedlot_audit.update_userid is 'Referring value for spar.seedlot.update_userid column'; comment on column spar.seedlot_audit.update_timestamp is 'Referring value for spar.seedlot.update_timestamp column'; -comment on column spar.seedlot_audit.revision_count is 'Referring value for spar.seedlot.revision_count column';/* +comment on column spar.seedlot_audit.revision_count is 'Referring value for spar.seedlot.revision_count column';/* -- Function to catch Insert/Update/Delete staments executed in seedlot table. -- Should be used in a trigger in seedlot table -- trigger statement in the bottom part of this script @@ -2088,14 +2094,14 @@ DECLARE v_new_data TEXT; v_auditrevision int; BEGIN - + if (TG_OP = 'UPDATE') then v_old_data := ROW(OLD.*); v_new_data := ROW(NEW.*); - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number) ; - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'U', /*db_user */ session_user::TEXT, @@ -2158,9 +2164,9 @@ BEGIN v_old_data := ROW(OLD.*); /*nsert into spar.logged_actions (schema_name,table_name,user_name,action,original_data,query) values (TG_TABLE_SCHEMA::TEXT,TG_TABLE_NAME::TEXT,session_user::TEXT,substring(TG_OP,1,1),v_old_data, current_query());*/ - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number) ; - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'D', /*db_user */ session_user::TEXT, @@ -2221,7 +2227,7 @@ BEGIN RETURN OLD; elsif (TG_OP = 'INSERT') then v_new_data := ROW(NEW.*); - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'I', /*db_user */ session_user::TEXT, @@ -2287,15 +2293,15 @@ BEGIN EXCEPTION WHEN data_exception then - --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [DATA EXCEPTION] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN unique_violation then - --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [UNIQUE] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN others then - --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); + --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [OTHER] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; END; @@ -2306,7 +2312,7 @@ SET search_path = pg_catalog, spar; -- Trigger to be attached on spar.seedlot table CREATE TRIGGER trg_seedlot_audit_DIU - AFTER INSERT OR UPDATE OR DELETE ON spar.seedlot + AFTER INSERT OR UPDATE OR DELETE ON spar.seedlot FOR EACH ROW EXECUTE PROCEDURE spar.seedlot_if_modified_func(); alter table spar.seedlot_audit add column seed_plan_unit_id smallint, @@ -2389,7 +2395,7 @@ comment on column spar.seedlot_audit.longitude_sec_max is 'Referring va comment on column spar.seedlot_audit.smp_mean_bv_growth is 'Referring value for spar.seedlot.smp_mean_bv_growth column'; comment on column spar.seedlot_audit.area_of_use_comment is 'Referring value for spar.seedlot.area_of_use_comment column'; -/* +/* -- Function to fix Insert/Update/Delete staments executed on seedlot the table. -- Should be used in a trigger on the seedlot table -- trigger statement in the bottom part of this script @@ -2403,7 +2409,7 @@ BEGIN if (TG_OP = 'UPDATE') then v_old_data := ROW(OLD.*); v_new_data := ROW(NEW.*); - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number); INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( @@ -2468,9 +2474,9 @@ BEGIN v_old_data := ROW(OLD.*); /* insert into spar.logged_actions (schema_name,table_name,user_name,action,original_data,query) values (TG_TABLE_SCHEMA::TEXT,TG_TABLE_NAME::TEXT,session_user::TEXT,substring(TG_OP,1,1),v_old_data, current_query());*/ - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number) ; - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'D', /*db_user */ session_user::TEXT, @@ -2531,7 +2537,7 @@ BEGIN RETURN OLD; elsif (TG_OP = 'INSERT') then v_new_data := ROW(NEW.*); - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'I', /*db_user */ session_user::TEXT, @@ -2597,15 +2603,15 @@ BEGIN EXCEPTION WHEN data_exception then - --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [DATA EXCEPTION] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN unique_violation then - --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [UNIQUE] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN others then - --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); + --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [OTHER] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; END; @@ -2619,7 +2625,7 @@ DROP TRIGGER trg_seedlot_audit_DIU ON spar.seedlot; -- Trigger to be attached on spar.seedlot table CREATE TRIGGER trg_seedlot_audit_DIU - AFTER INSERT OR UPDATE OR DELETE ON spar.seedlot + AFTER INSERT OR UPDATE OR DELETE ON spar.seedlot FOR EACH ROW EXECUTE PROCEDURE spar.seedlot_if_modified_func(); alter table spar.seedlot @@ -2636,7 +2642,7 @@ alter table spar.seedlot_audit comment on column spar.seedlot_audit.approved_timestamp is 'Referring value for spar.seedlot.approved_timestamp column'; comment on column spar.seedlot_audit.approved_userid is 'Referring value for spar.seedlot.approved_userid column'; -/* +/* -- Function to fix Insert/Update/Delete staments executed on seedlot the table. -- Should be used in a trigger on the seedlot table -- trigger statement in the bottom part of this script @@ -2652,7 +2658,7 @@ BEGIN if (TG_OP = 'UPDATE') then v_old_data := ROW(OLD.*); v_new_data := ROW(NEW.*); - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number); INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) VALUES( @@ -2708,7 +2714,7 @@ BEGIN /*declared_timestamp */ NEW.declared_timestamp, /*entry_userid */ NEW.entry_userid, /*entry_timestamp */ NEW.entry_timestamp, - + /*seed_plan_unit_id */ NEW.seed_plan_unit_id, /*bgc_zone_code */ NEW.bgc_zone_code, /*bgc_subzone_code */ NEW.bgc_subzone_code, @@ -2750,7 +2756,7 @@ BEGIN /*area_of_use_comment */ NEW.area_of_use_comment, /*approved_timestamp */ NEW.approved_timestamp, /*approved_userid */ NEW.approved_userid, - + /*update_userid */ NEW.update_userid, /*update_timestamp */ NEW.update_timestamp, /*revision_count */ NEW.revision_count @@ -2760,9 +2766,9 @@ BEGIN v_old_data := ROW(OLD.*); /* insert into spar.logged_actions (schema_name,table_name,user_name,action,original_data,query) values (TG_TABLE_SCHEMA::TEXT,TG_TABLE_NAME::TEXT,session_user::TEXT,substring(TG_OP,1,1),v_old_data, current_query());*/ - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number) ; - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'D', /*db_user */ session_user::TEXT, @@ -2816,7 +2822,7 @@ BEGIN /*declared_timestamp */ OLD.declared_timestamp, /*entry_userid */ OLD.entry_userid, /*entry_timestamp */ OLD.entry_timestamp, - + /*seed_plan_unit_id */ OLD.seed_plan_unit_id, /*bgc_zone_code */ OLD.bgc_zone_code, /*bgc_subzone_code */ OLD.bgc_subzone_code, @@ -2858,7 +2864,7 @@ BEGIN /*area_of_use_comment */ OLD.area_of_use_comment, /*approved_timestamp */ OLD.approved_timestamp, /*approved_userid */ OLD.approved_userid, - + /*update_userid */ OLD.update_userid, /*update_timestamp */ OLD.update_timestamp, /*revision_count */ OLD.revision_count @@ -2866,7 +2872,7 @@ BEGIN RETURN OLD; elsif (TG_OP = 'INSERT') then v_new_data := ROW(NEW.*); - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'I', /*db_user */ session_user::TEXT, @@ -2920,7 +2926,7 @@ BEGIN /*declared_timestamp */ NEW.declared_timestamp, /*entry_userid */ NEW.entry_userid, /*entry_timestamp */ NEW.entry_timestamp, - + /*seed_plan_unit_id */ NEW.seed_plan_unit_id, /*bgc_zone_code */ NEW.bgc_zone_code, /*bgc_subzone_code */ NEW.bgc_subzone_code, @@ -2962,7 +2968,7 @@ BEGIN /*area_of_use_comment */ NEW.area_of_use_comment, /*approved_timestamp */ NEW.approved_timestamp, /*approved_userid */ NEW.approved_userid, - + /*update_userid */ NEW.update_userid, /*update_timestamp */ NEW.update_timestamp, /*revision_count */ NEW.revision_count @@ -2975,15 +2981,15 @@ BEGIN EXCEPTION WHEN data_exception then - --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [DATA EXCEPTION] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN unique_violation then - --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [UNIQUE] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN others then - --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); + --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [OTHER] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; END; @@ -3034,7 +3040,7 @@ comment on column spar.seedlot_audit.longitude_sec_max is 'Referring va comment on column spar.seedlot_audit.smp_mean_bv_growth is 'Referring value for spar.seedlot.smp_mean_bv_growth column'; comment on column spar.seedlot_audit.area_of_use_comment is 'Referring value for spar.seedlot.area_of_use_comment column'; -/* +/* -- Function to fix Insert/Update/Delete staments executed on seedlot the table. -- Should be used in a trigger on the seedlot table -- trigger statement in the bottom part of this script @@ -3048,7 +3054,7 @@ BEGIN if (TG_OP = 'UPDATE') then v_old_data := ROW(OLD.*); v_new_data := ROW(NEW.*); - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number); INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( @@ -3113,9 +3119,9 @@ BEGIN v_old_data := ROW(OLD.*); /* insert into spar.logged_actions (schema_name,table_name,user_name,action,original_data,query) values (TG_TABLE_SCHEMA::TEXT,TG_TABLE_NAME::TEXT,session_user::TEXT,substring(TG_OP,1,1),v_old_data, current_query());*/ - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number) ; - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'D', /*db_user */ session_user::TEXT, @@ -3176,7 +3182,7 @@ BEGIN RETURN OLD; elsif (TG_OP = 'INSERT') then v_new_data := ROW(NEW.*); - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'I', /*db_user */ session_user::TEXT, @@ -3242,15 +3248,15 @@ BEGIN EXCEPTION WHEN data_exception then - --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [DATA EXCEPTION] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN unique_violation then - --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [UNIQUE] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN others then - --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); + --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [OTHER] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; END; @@ -3264,15 +3270,15 @@ DROP TRIGGER trg_seedlot_audit_DIU ON spar.seedlot; -- Trigger to be attached on spar.seedlot table CREATE TRIGGER trg_seedlot_audit_DIU - AFTER INSERT OR UPDATE OR DELETE ON spar.seedlot + AFTER INSERT OR UPDATE OR DELETE ON spar.seedlot FOR EACH ROW EXECUTE PROCEDURE spar.seedlot_if_modified_func(); - + comment on column spar.seedlot_audit.seed_plan_unit_id is 'Referring value for spar.seedlot.approved_timestamp column'; comment on column spar.seedlot_audit.bgc_zone_code is 'Referring value for spar.seedlot.approved_userid column'; comment on column spar.seedlot_audit.approved_timestamp is 'Referring value for spar.seedlot.approved_timestamp column'; comment on column spar.seedlot_audit.approved_userid is 'Referring value for spar.seedlot.approved_userid column'; -/* +/* -- Function to fix Insert/Update/Delete staments executed on seedlot the table. -- Should be used in a trigger on the seedlot table -- trigger statement in the bottom part of this script @@ -3288,7 +3294,7 @@ BEGIN if (TG_OP = 'UPDATE') then v_old_data := ROW(OLD.*); v_new_data := ROW(NEW.*); - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number); INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) VALUES( @@ -3344,7 +3350,7 @@ BEGIN /*declared_timestamp */ NEW.declared_timestamp, /*entry_userid */ NEW.entry_userid, /*entry_timestamp */ NEW.entry_timestamp, - + /*seed_plan_unit_id */ NEW.seed_plan_unit_id, /*bgc_zone_code */ NEW.bgc_zone_code, /*bgc_subzone_code */ NEW.bgc_subzone_code, @@ -3386,7 +3392,7 @@ BEGIN /*area_of_use_comment */ NEW.area_of_use_comment, /*approved_timestamp */ NEW.approved_timestamp, /*approved_userid */ NEW.approved_userid, - + /*update_userid */ NEW.update_userid, /*update_timestamp */ NEW.update_timestamp, /*revision_count */ NEW.revision_count @@ -3396,9 +3402,9 @@ BEGIN v_old_data := ROW(OLD.*); /* insert into spar.logged_actions (schema_name,table_name,user_name,action,original_data,query) values (TG_TABLE_SCHEMA::TEXT,TG_TABLE_NAME::TEXT,session_user::TEXT,substring(TG_OP,1,1),v_old_data, current_query());*/ - /* AUDIT REVISION number used to order the statements executed in the row */ + /* AUDIT REVISION number used to order the statements executed in the row */ v_auditrevision := (SELECT MAX(COALESCE(audit_revision_version,1))+1 FROM spar.seedlot_audit WHERE seedlot_number = NEW.seedlot_number) ; - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'D', /*db_user */ session_user::TEXT, @@ -3452,7 +3458,7 @@ BEGIN /*declared_timestamp */ OLD.declared_timestamp, /*entry_userid */ OLD.entry_userid, /*entry_timestamp */ OLD.entry_timestamp, - + /*seed_plan_unit_id */ OLD.seed_plan_unit_id, /*bgc_zone_code */ OLD.bgc_zone_code, /*bgc_subzone_code */ OLD.bgc_subzone_code, @@ -3494,7 +3500,7 @@ BEGIN /*area_of_use_comment */ OLD.area_of_use_comment, /*approved_timestamp */ OLD.approved_timestamp, /*approved_userid */ OLD.approved_userid, - + /*update_userid */ OLD.update_userid, /*update_timestamp */ OLD.update_timestamp, /*revision_count */ OLD.revision_count @@ -3502,7 +3508,7 @@ BEGIN RETURN OLD; elsif (TG_OP = 'INSERT') then v_new_data := ROW(NEW.*); - INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) + INSERT INTO spar.seedlot_audit (spar_audit_code,db_user,audit_revision_version,seedlot_number,seedlot_status_code,applicant_client_number,applicant_locn_code,applicant_email_address,vegetation_code,genetic_class_code,seedlot_source_code,to_be_registrd_ind,bc_source_ind,collection_client_number,collection_locn_code,collection_start_date,collection_end_date,no_of_containers,vol_per_container,clctn_volume,seedlot_comment,interm_strg_client_number,interm_strg_locn_code,interm_strg_st_date,interm_strg_end_date,interm_facility_code,female_gametic_mthd_code,male_gametic_mthd_code,controlled_cross_ind,biotech_processes_ind,pollen_contamination_ind,pollen_contamination_pct,contaminant_pollen_bv,pollen_contamination_mthd_code,total_parent_trees,smp_success_pct,effective_pop_size,smp_parents_outside,non_orchard_pollen_contam_pct,extractory_client_number,extractory_locn_code,extraction_st_date,extraction_end_date,temporary_strg_client_number,temporary_strg_locn_code,temporary_strg_start_date,temporary_strg_end_date,interm_strg_locn,declared_userid,declared_timestamp,entry_userid,entry_timestamp,seed_plan_unit_id,bgc_zone_code,bgc_subzone_code,variant,bec_version_id,elevation,latitude_degrees,latitude_minutes,latitude_seconds,longitude_degrees,longitude_minutes,longitude_seconds,collection_elevation,collection_elevation_min,collection_elevation_max,collection_latitude_deg,collection_latitude_min,collection_latitude_sec,collection_latitude_code,collection_longitude_deg,collection_longitude_min,collection_longitude_sec,collection_longitude_code,elevation_min,elevation_max,latitude_deg_min,latitude_min_min,latitude_sec_min,latitude_deg_max,latitude_min_max,latitude_sec_max,longitude_deg_min,longitude_min_min,longitude_sec_min,longitude_deg_max,longitude_min_max,longitude_sec_max,smp_mean_bv_growth,area_of_use_comment,approved_timestamp,approved_userid,update_userid,update_timestamp,revision_count) VALUES( /*spar_audit_code */ 'I', /*db_user */ session_user::TEXT, @@ -3556,7 +3562,7 @@ BEGIN /*declared_timestamp */ NEW.declared_timestamp, /*entry_userid */ NEW.entry_userid, /*entry_timestamp */ NEW.entry_timestamp, - + /*seed_plan_unit_id */ NEW.seed_plan_unit_id, /*bgc_zone_code */ NEW.bgc_zone_code, /*bgc_subzone_code */ NEW.bgc_subzone_code, @@ -3598,7 +3604,7 @@ BEGIN /*area_of_use_comment */ NEW.area_of_use_comment, /*approved_timestamp */ NEW.approved_timestamp, /*approved_userid */ NEW.approved_userid, - + /*update_userid */ NEW.update_userid, /*update_timestamp */ NEW.update_timestamp, /*revision_count */ NEW.revision_count @@ -3611,15 +3617,15 @@ BEGIN EXCEPTION WHEN data_exception then - --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('DATA EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [DATA EXCEPTION] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN unique_violation then - --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); + --insert into spar.error_catch (erro) VALUES(CONCAT('UNIQUE EXCEPTION ',SQLERRM)); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [UNIQUE] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; WHEN others then - --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); + --insert into spar.error_catch (erro) VALUES(CONCAT(v_auditrevision, CONCAT('OTHER EXCEPTION ',SQLERRM))); RAISE WARNING '[AUDIT.IF_MODIFIED_FUNC] - UDF ERROR [OTHER] - SQLSTATE: %, SQLERRM: %',SQLSTATE,SQLERRM; RETURN NULL; END; @@ -4345,7 +4351,7 @@ DROP TRIGGER trg_seedlot_audit_DIU ON spar.seedlot; -- Trigger to be attached on spar.seedlot table CREATE TRIGGER trg_seedlot_audit_DIU - AFTER INSERT OR UPDATE OR DELETE ON spar.seedlot + AFTER INSERT OR UPDATE OR DELETE ON spar.seedlot FOR EACH ROW EXECUTE PROCEDURE spar.seedlot_if_modified_func(); @@ -4414,13 +4420,13 @@ ADD CONSTRAINT unique_seedlot_orchard_key UNIQUE (seedlot_number, orchard_id); -/* +/* ----- ETL Tool Changes after PoC (LATEST VERSION=V_36) */ /* --------------------------- -DDL ------------------------------- */ +DDL +------------------------------ */ DROP TABLE IF EXISTS spar.ETL_EXECUTION_MAP; DROP TABLE IF EXISTS spar.ETL_EXECUTION_LOG; @@ -4458,21 +4464,21 @@ comment on column spar.ETL_EXECUTION_MAP.interface_id is 'Unique i comment on column spar.ETL_EXECUTION_MAP.execution_id is 'Execution ID number to represent a instance of interface_id. Part of the composite PK, with interface_id column.'; comment on column spar.ETL_EXECUTION_MAP.execution_parent_id is 'Reference to a parent execution ID that groups one or more execution_id in a batch run. If null, then this execution_id is a parent.'; comment on column spar.ETL_EXECUTION_MAP.execution_order is 'Order of execution of this instance in a collection of same execution_parent_id. Execution runs in ascending order. If it is less than 0, it will not run.'; -comment on column spar.ETL_EXECUTION_MAP.source_file is 'Source instruction file for batch execution'; -comment on column spar.ETL_EXECUTION_MAP.source_db_type is 'Database type of the source connection. Expected ORACLE or POSTGRES.'; -comment on column spar.ETL_EXECUTION_MAP.source_name is 'Source name of this batch execution'; +comment on column spar.ETL_EXECUTION_MAP.source_file is 'Source instruction file for batch execution'; +comment on column spar.ETL_EXECUTION_MAP.source_db_type is 'Database type of the source connection. Expected ORACLE or POSTGRES.'; +comment on column spar.ETL_EXECUTION_MAP.source_name is 'Source name of this batch execution'; comment on column spar.ETL_EXECUTION_MAP.source_table is 'Source table (if it is a single table) of this batch execution'; -comment on column spar.ETL_EXECUTION_MAP.target_file is 'Target instruction file for batch execution'; -comment on column spar.ETL_EXECUTION_MAP.target_db_type is 'Database type of the target connection. Expected ORACLE or POSTGRES.'; -comment on column spar.ETL_EXECUTION_MAP.target_name is 'Target name of this batch execution'; -comment on column spar.ETL_EXECUTION_MAP.target_table is 'Target table (if it is a single table) of this batch execution'; -comment on column spar.ETL_EXECUTION_MAP.target_primary_key is 'Primary key of the target table of this batch execution'; -comment on column spar.ETL_EXECUTION_MAP.run_mode is 'Identifies how data is replicated:DELETE_INSERT,UPSERT,UPSERT_WTIH_DELETE'; -comment on column spar.ETL_EXECUTION_MAP.upsert_with_delete_key is 'For run_mode UPSERT_WTIH_DELETE, specifies the WHERE clause columns for delete'; -comment on column spar.ETL_EXECUTION_MAP.ignore_columns_on_update is 'Comma seperated list of columns to ignore when updating'; -comment on column spar.ETL_EXECUTION_MAP.retry_errors is 'If true, this process will execute again old instances with errors in ETL_EXECUTION_LOG_HIST'; -comment on column spar.ETL_EXECUTION_MAP.updated_at is 'Timestamp of the last time this record was updated'; -comment on column spar.ETL_EXECUTION_MAP.created_at is 'Timestamp of the time this record was created'; +comment on column spar.ETL_EXECUTION_MAP.target_file is 'Target instruction file for batch execution'; +comment on column spar.ETL_EXECUTION_MAP.target_db_type is 'Database type of the target connection. Expected ORACLE or POSTGRES.'; +comment on column spar.ETL_EXECUTION_MAP.target_name is 'Target name of this batch execution'; +comment on column spar.ETL_EXECUTION_MAP.target_table is 'Target table (if it is a single table) of this batch execution'; +comment on column spar.ETL_EXECUTION_MAP.target_primary_key is 'Primary key of the target table of this batch execution'; +comment on column spar.ETL_EXECUTION_MAP.run_mode is 'Identifies how data is replicated:DELETE_INSERT,UPSERT,UPSERT_WTIH_DELETE'; +comment on column spar.ETL_EXECUTION_MAP.upsert_with_delete_key is 'For run_mode UPSERT_WTIH_DELETE, specifies the WHERE clause columns for delete'; +comment on column spar.ETL_EXECUTION_MAP.ignore_columns_on_update is 'Comma seperated list of columns to ignore when updating'; +comment on column spar.ETL_EXECUTION_MAP.retry_errors is 'If true, this process will execute again old instances with errors in ETL_EXECUTION_LOG_HIST'; +comment on column spar.ETL_EXECUTION_MAP.updated_at is 'Timestamp of the last time this record was updated'; +comment on column spar.ETL_EXECUTION_MAP.created_at is 'Timestamp of the time this record was created'; create table spar.ETL_EXECUTION_LOG( from_timestamp timestamp not null, @@ -4484,11 +4490,11 @@ created_at timestamp default now() not null comment on table spar.ETL_EXECUTION_LOG is 'ETL Tool monitoring table to store execution current instance of batch processing interfaces'; -comment on column spar.ETL_EXECUTION_LOG.from_timestamp is 'From timestamp for the run (i.e. update_timestamp between from_timestamp and to_timetsamp)'; -comment on column spar.ETL_EXECUTION_LOG.to_timestamp is 'To timestamp for the run (i.e. update_timestamp between from_timestamp and to_timetsamp)'; -comment on column spar.ETL_EXECUTION_LOG.run_status is 'Status of ETL execution'; -comment on column spar.ETL_EXECUTION_LOG.updated_at is 'Timestamp of the last time this record was updated'; -comment on column spar.ETL_EXECUTION_LOG.created_at is 'Timestamp of the time this record was created'; +comment on column spar.ETL_EXECUTION_LOG.from_timestamp is 'From timestamp for the run (i.e. update_timestamp between from_timestamp and to_timetsamp)'; +comment on column spar.ETL_EXECUTION_LOG.to_timestamp is 'To timestamp for the run (i.e. update_timestamp between from_timestamp and to_timetsamp)'; +comment on column spar.ETL_EXECUTION_LOG.run_status is 'Status of ETL execution'; +comment on column spar.ETL_EXECUTION_LOG.updated_at is 'Timestamp of the last time this record was updated'; +comment on column spar.ETL_EXECUTION_LOG.created_at is 'Timestamp of the time this record was created'; create table spar.ETL_EXECUTION_SCHEDULE( @@ -4505,10 +4511,10 @@ constraint etl_execution_schedule_pk comment on table spar.ETL_EXECUTION_SCHEDULE is 'ETL Tool schedule table to define what delta time should be used in the next execution'; comment on column spar.ETL_EXECUTION_SCHEDULE.interface_id is 'Unique interface name to represent a batch execution. Refer to EXECUTION_MAP table PK'; comment on column spar.ETL_EXECUTION_SCHEDULE.execution_id is 'The execution ID that represent a batch execution. Refer to EXECUTION_MAP table PK'; -comment on column spar.ETL_EXECUTION_SCHEDULE.last_run_ts is 'Last timestamp this interface/execution_id was executed for batch execution'; -comment on column spar.ETL_EXECUTION_SCHEDULE.current_run_ts is 'Current timestamp this interface was executed of this batch execution. It will be the next last_run_ts for this execution.'; -comment on column spar.ETL_EXECUTION_SCHEDULE.updated_at is 'Timestamp of the last time this record was updated'; -comment on column spar.ETL_EXECUTION_SCHEDULE.created_at is 'Timestamp of the time this record was created'; +comment on column spar.ETL_EXECUTION_SCHEDULE.last_run_ts is 'Last timestamp this interface/execution_id was executed for batch execution'; +comment on column spar.ETL_EXECUTION_SCHEDULE.current_run_ts is 'Current timestamp this interface was executed of this batch execution. It will be the next last_run_ts for this execution.'; +comment on column spar.ETL_EXECUTION_SCHEDULE.updated_at is 'Timestamp of the last time this record was updated'; +comment on column spar.ETL_EXECUTION_SCHEDULE.created_at is 'Timestamp of the time this record was created'; create table spar.etl_execution_log_hist @@ -4519,266 +4525,266 @@ comment on table spar.ETL_EXECUTION_LOG_HIST is 'ETL Tool monitoring table to s comment on column spar.ETL_EXECUTION_LOG_HIST.entry_timestamp is 'The timestamp when the record was inserted'; comment on column spar.ETL_EXECUTION_LOG_HIST.log_details is 'JSON document with step statistics'; -/* +/* -- DML for Generic interface_id for generic running */ /* ORACLE TO POSTGRES ORCHESTRATION: TEST EXECUTION */ insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 0 as execution_id, +select 0 as execution_id, null as execution_parent_id , - 'ETL-RUN-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'ETL-RUN-ORACLE-TO-POSTGRES-TEST' as interface_id, null as source_file, - 'MAIN PROCESS FROM ORACLE' as source_name, + 'MAIN PROCESS FROM ORACLE' as source_name, null as source_table, null as source_db_type, null as target_file, - 'MAIN PROCESS TO POSTGRES' as target_name, - null as target_table, + 'MAIN PROCESS TO POSTGRES' as target_name, + null as target_table, null as target_db_type, - null as target_primary_key, + null as target_primary_key, 0 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'ETL-RUN-ORACLE-TO-POSTGRES-TEST'); insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 1 as execution_id, +select 1 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'SPAR-SEEDLOT-ORACLE-TO-POSTGRES-TEST' as interface_id, '/SQL/SPAR/ORACLE_SEEDLOT_EXTRACT.sql' as source_file, - 'ORACLE THE' as source_name, + 'ORACLE THE' as source_name, 'SEEDLOT' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SEEDLOT_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number' as target_primary_key, 1 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-ORACLE-TO-POSTGRES-TEST'); /* POSTGRES TO ORACLE ORCHESTRATION: TEST EXECUTION */ insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 2 as execution_id, +select 2 as execution_id, null as execution_parent_id , - 'ETL-RUN-POSTGRES-TO-ORACLE-TEST' as interface_id, + 'ETL-RUN-POSTGRES-TO-ORACLE-TEST' as interface_id, null as source_file, - 'MAIN PROCESS FROM `POSTGRES' as source_name, + 'MAIN PROCESS FROM `POSTGRES' as source_name, null as source_table, null as source_db_type, null as target_file, - 'MAIN PROCESS TO ORACLE' as target_name, - null as target_table, - null as target_db_type, - null as target_primary_key, + 'MAIN PROCESS TO ORACLE' as target_name, + null as target_table, + null as target_db_type, + null as target_primary_key, 0 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'ETL-RUN-POSTGRES-TO-ORACLE-TEST'); insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 3 as execution_id, +select 3 as execution_id, 2 as execution_parent_id , - 'SEEDLOT-ORACLE-TO-SPAR-POSTGRES-TEST' as interface_id, + 'SEEDLOT-ORACLE-TO-SPAR-POSTGRES-TEST' as interface_id, '/SQL/SPAR/POSTGRES_SEEDLOT_EXTRACT.sql' as source_file, - 'NEW SPAR' as source_name, + 'NEW SPAR' as source_name, 'spar.seedlot' as source_table, 'POSTGRES' as source_db_type, '/SQL/SPAR/ORACLE_SEEDLOT_LOAD.sql' as target_file, - 'ORACLE THE' as target_name, - 'SEEDLOT' as target_table, - 'ORACLE' as target_db_type, - 'seedlot_number' as target_primary_key, + 'ORACLE THE' as target_name, + 'SEEDLOT' as target_table, + 'ORACLE' as target_db_type, + 'seedlot_number' as target_primary_key, 1 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SEEDLOT-ORACLE-TO-SPAR-POSTGRES-TEST'); ---- MAIN EXECUTION -- Processes gathering data from Oracle to Postgres (First to bring all historical data) --- INCLUDING PROCESS SMP_MIX from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS SMP_MIX from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 4 as execution_id, +select 4 as execution_id, 0 as execution_parent_id , - 'SPAR-SMPMIX-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'SPAR-SMPMIX-ORACLE-TO-POSTGRES-TEST' as interface_id, '/SQL/SPAR/ORACLE_SMP_MIX_EXTRACT.sql' as source_file, - 'ORACLE THE' as source_name, + 'ORACLE THE' as source_name, 'SMP_MIX' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SMP_MIX_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.smp_mix' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,parent_tree_id' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.smp_mix' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,parent_tree_id' as target_primary_key, 2 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SMPMIX-ORACLE-TO-POSTGRES-TEST'); insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 5 as execution_id, +select 5 as execution_id, 0 as execution_parent_id , - 'SPAR-SMPMIX-GEN-QLTY-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'SPAR-SMPMIX-GEN-QLTY-ORACLE-TO-POSTGRES-TEST' as interface_id, '/SQL/SPAR/ORACLE_SMP_MIX_GEN_QLTY_EXTRACT.sql' as source_file, - 'ORACLE THE' as source_name, + 'ORACLE THE' as source_name, 'SMP_MIX_GEN_QLTY' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SMP_MIX_GEN_QLTY_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.smp_mix_gen_qlty' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,parent_tree_id,genetic_type_code,genetic_worth_code' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.smp_mix_gen_qlty' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,parent_tree_id,genetic_type_code,genetic_worth_code' as target_primary_key, 3 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SMPMIX-GEN-QLTY-ORACLE-TO-POSTGRES-TEST'); --- INCLUDING PROCESS SEEDLOT_PARENT_TREE_SMP_MIX from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS SEEDLOT_PARENT_TREE_SMP_MIX from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 6 as execution_id, +select 6 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-PARENT-TREE-ORACLE-TO-POSTGRES-TEST' as interface_id, - '/SQL/SPAR/ORACLE_SEEDLOT_PARENT_TREE_EXTRACT.sql' as source_file, - 'ORACLE THE' as source_name, + 'SPAR-SEEDLOT-PARENT-TREE-ORACLE-TO-POSTGRES-TEST' as interface_id, + '/SQL/SPAR/ORACLE_SEEDLOT_PARENT_TREE_EXTRACT.sql' as source_file, + 'ORACLE THE' as source_name, 'SEEDLOT_PARENT_TREE' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SEEDLOT_PARENT_TREE_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot_parent_tree' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,parent_tree_id' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot_parent_tree' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,parent_tree_id' as target_primary_key, 4 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-PARENT-TREE-ORACLE-TO-POSTGRES-TEST'); --- INCLUDING PROCESS SEEDLOT_PARENT_TREE_SMP_MIX from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS SEEDLOT_PARENT_TREE_SMP_MIX from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 7 as execution_id, +select 7 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-PARENT-TREE-SMPMIX-ORACLE-TO-POSTGRES-TEST' as interface_id, - '/SQL/SPAR/ORACLE_PARENT_TREE_SMPMIX_EXTRACT.sql' as source_file, - 'ORACLE THE' as source_name, + 'SPAR-SEEDLOT-PARENT-TREE-SMPMIX-ORACLE-TO-POSTGRES-TEST' as interface_id, + '/SQL/SPAR/ORACLE_PARENT_TREE_SMPMIX_EXTRACT.sql' as source_file, + 'ORACLE THE' as source_name, 'SMP_MIX_GEN_QLTY' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_PARENT_TREE_SMPMIX_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot_parent_tree_smp_mix' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,parent_tree_id,genetic_type_code,genetic_worth_code' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot_parent_tree_smp_mix' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,parent_tree_id,genetic_type_code,genetic_worth_code' as target_primary_key, 5 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-PARENT-TREE-SMPMIX-ORACLE-TO-POSTGRES-TEST'); --- INCLUDING PROCESS SEEDLOT_ORCHARD from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS SEEDLOT_ORCHARD from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 8 as execution_id, +select 8 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-ORCHARD-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'SPAR-SEEDLOT-ORCHARD-ORACLE-TO-POSTGRES-TEST' as interface_id, '/SQL/SPAR/ORACLE_SEEDLOT_ORCHARD_EXTRACT.sql' as source_file, -- SAME AS SMP_MIX_GEN_QLTY Extract (same structure) - 'ORACLE THE' as source_name, + 'ORACLE THE' as source_name, 'SEEDLOT' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SEEDLOT_ORCHARD_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot_orchard' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,primary_ind' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot_orchard' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,primary_ind' as target_primary_key, 6 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-ORCHARD-ORACLE-TO-POSTGRES-TEST'); --- INCLUDING PROCESS SEEDLOT_GENETIC_WORTH from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS SEEDLOT_GENETIC_WORTH from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 9 as execution_id, +select 9 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-GENETIC-WORTH-ORACLE-TO-POSTGRES-TEST' as interface_id, - '/SQL/SPAR/ORACLE_SEEDLOT_GENETIC_WORTH_EXTRACT.sql' as source_file, - 'ORACLE THE' as source_name, + 'SPAR-SEEDLOT-GENETIC-WORTH-ORACLE-TO-POSTGRES-TEST' as interface_id, + '/SQL/SPAR/ORACLE_SEEDLOT_GENETIC_WORTH_EXTRACT.sql' as source_file, + 'ORACLE THE' as source_name, 'SMP_MIX_GEN_QLTY' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SEEDLOT_GENETIC_WORTH_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot_genetic_worth' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,genetic_worth_code' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot_genetic_worth' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,genetic_worth_code' as target_primary_key, 7 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-GENETIC-WORTH-ORACLE-TO-POSTGRES-TEST'); --- INCLUDING PROCESS SEEDLOT_OWNER_QUANTITY from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS SEEDLOT_OWNER_QUANTITY from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 10 as execution_id, +select 10 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-OWNER-QUANTITY-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'SPAR-SEEDLOT-OWNER-QUANTITY-ORACLE-TO-POSTGRES-TEST' as interface_id, '/SQL/SPAR/ORACLE_SEEDLOT_OWNER_QUANTITY_EXTRACT.sql' as source_file, -- SAME AS SMP_MIX_GEN_QLTY Extract (same structure) - 'ORACLE THE' as source_name, + 'ORACLE THE' as source_name, 'SEEDLOT_OWNER_QUANTITY' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SEEDLOT_OWNER_QUANTITY_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot_owner_quantity' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,owner_client_number,owner_locn_code' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot_owner_quantity' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,owner_client_number,owner_locn_code' as target_primary_key, 8 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-OWNER-QUANTITY-ORACLE-TO-POSTGRES-TEST'); --- INCLUDING PROCESS seedlot_collection_method from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS seedlot_collection_method from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 11 as execution_id, +select 11 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-COLLECTION-METHOD-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'SPAR-SEEDLOT-COLLECTION-METHOD-ORACLE-TO-POSTGRES-TEST' as interface_id, '/SQL/SPAR/ORACLE_SEEDLOT_COLLECTION_METHOD_EXTRACT.sql' as source_file, -- SAME AS SMP_MIX_GEN_QLTY Extract (same structure) - 'ORACLE THE' as source_name, + 'ORACLE THE' as source_name, 'CONE_COLLECTION_METHOD_CODE' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SEEDLOT_COLLECTION_METHOD_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot_collection_method' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,cone_collection_method_code' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot_collection_method' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,cone_collection_method_code' as target_primary_key, 9 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-COLLECTION-METHOD-ORACLE-TO-POSTGRES-TEST'); --- INCLUDING PROCESS SEEDLOT_PARENT_TREE_GEN_QLTY from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS SEEDLOT_PARENT_TREE_GEN_QLTY from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 12 as execution_id, +select 12 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-PARENT-TREE-GEN-QLTY-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'SPAR-SEEDLOT-PARENT-TREE-GEN-QLTY-ORACLE-TO-POSTGRES-TEST' as interface_id, '/SQL/SPAR/ORACLE_SEEDLOT_PARENT_TREE_GEN_QLTY_EXTRACT.sql' as source_file, -- SAME AS SMP_MIX_GEN_QLTY Extract (same structure) - 'ORACLE THE' as source_name, + 'ORACLE THE' as source_name, 'SEEDLOT_PARENT_TREE_GEN_QLTY' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SEEDLOT_COLLECTION_METHOD_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot_parent_tree_gen_qlty' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,parent_tree_id,genetic_type_code,genetic_worth_code' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot_parent_tree_gen_qlty' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,parent_tree_id,genetic_type_code,genetic_worth_code' as target_primary_key, 10 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-PARENT-TREE-GEN-QLTY-ORACLE-TO-POSTGRES-TEST'); --- INCLUDING PROCESS SEEDLOT_SEED_PLAN_ZONE from Oracle to Postgres in EXECUTION_ID=0 +-- INCLUDING PROCESS SEEDLOT_SEED_PLAN_ZONE from Oracle to Postgres in EXECUTION_ID=0 insert into spar.etl_execution_map(execution_id, execution_parent_id ,interface_id, source_file,source_name, source_table, source_db_type, target_file,target_name, target_table, target_db_type,target_primary_key, execution_order) -select 13 as execution_id, +select 13 as execution_id, 0 as execution_parent_id , - 'SPAR-SEEDLOT-SEED-PLAN-ZONE-ORACLE-TO-POSTGRES-TEST' as interface_id, + 'SPAR-SEEDLOT-SEED-PLAN-ZONE-ORACLE-TO-POSTGRES-TEST' as interface_id, '/SQL/SPAR/ORACLE_SEEDLOT_SEED_PLAN_ZONE_EXTRACT.sql' as source_file, -- SAME AS SMP_MIX_GEN_QLTY Extract (same structure) - 'ORACLE THE' as source_name, + 'ORACLE THE' as source_name, 'SEEDLOT_PLAN_ZONE' as source_table, 'ORACLE' as source_db_type, '/SQL/SPAR/POSTGRES_SEEDLOT_SEED_PLAN_ZONE_UPSERT.sql' as target_file, - 'NEW SPAR' as target_name, - 'spar.seedlot_seed_plan_zone' as target_table, - 'POSTGRES' as target_db_type, - 'seedlot_number,seed_plan_zone_code' as target_primary_key, + 'NEW SPAR' as target_name, + 'spar.seedlot_seed_plan_zone' as target_table, + 'POSTGRES' as target_db_type, + 'seedlot_number,seed_plan_zone_code' as target_primary_key, 11 as execution_order where not exists (select 1 from spar.etl_execution_map where interface_id = 'SPAR-SEEDLOT-SEED-PLAN-ZONE-ORACLE-TO-POSTGRES-TEST'); \ No newline at end of file diff --git a/data_prep/tests/test_docker_parser.py b/data_prep/tests/test_docker_parser.py index 405f31c..6bf763f 100644 --- a/data_prep/tests/test_docker_parser.py +++ b/data_prep/tests/test_docker_parser.py @@ -4,7 +4,7 @@ import logging -import docker_parser +import data_prep.db_env_utils.docker_parser as docker_parser LOGGER = logging.getLogger(__name__) diff --git a/docker-compose.yml b/docker-compose.yml index 68f5df5..2cb7552 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -107,16 +107,14 @@ services: condition: service_completed_successfully postgres-data-load: - image: python:3.13.0-slim-bookworm container_name: postgres-data-load - entrypoint: ["/application/docker_run_SPAR_TEST.sh"] - working_dir: /application + build: + context: . + dockerfile: Dockerfile.pg_ingest + command: ["python", "db_env_utils/main_spar_ingest.py", "TEST"] + working_dir: /app volumes: - - "./data_prep:/application" - - "./poetry.lock:/application/poetry.lock" - - "./pyproject.toml:/application/pyproject.toml" - - "./docker-compose.yml:/application/docker-compose.yml" - - "./data:/application/data" + - "./data_prep/docker_data:/app/data" env_file: - ".env" environment: @@ -152,7 +150,7 @@ services: container_name: oracle-migrations command: info migrate info volumes: - - "./migrations_ora/sql:/flyway/sql:ro" + - "./data_prep/migrations_ora/sql:/flyway/sql:ro" environment: <<: *oracle-vars FLYWAY_USER: *ORACLE_USER @@ -164,17 +162,14 @@ services: condition: service_healthy oracle-data-load: - image: python:3.13-slim-bookworm container_name: oracle-data-load - # "CMD", - entrypoint: [ "/application/docker_run_ORA_TEST.sh"] - working_dir: /application + build: + context: . + dockerfile: Dockerfile.ora_ingest + command: ["python", "db_env_utils/main_ora_ingest.py", "TEST"] + # working_dir: /app volumes: - - "./data_prep:/application" - - "./poetry.lock:/application/poetry.lock" - - "./pyproject.toml:/application/pyproject.toml" - - "./docker-compose.yml:/application/docker-compose.yml" - - "./data:/application/data" + - "./data_prep/docker_data:/app/data" environment: <<: [*oracle-vars] env_file: diff --git a/oradb/README.md b/oradb/README.md deleted file mode 100644 index d9dd541..0000000 --- a/oradb/README.md +++ /dev/null @@ -1,2 +0,0 @@ -Contains the init (db_init) script used by the docker oracle db when the database gets -initialized. diff --git a/poetry.lock b/poetry.lock deleted file mode 100644 index 60c4a26..0000000 --- a/poetry.lock +++ /dev/null @@ -1,1627 +0,0 @@ -# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. - 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