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Remove legend from final UMAP plot #22

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lsaund11 opened this issue Dec 28, 2020 · 2 comments
Open

Remove legend from final UMAP plot #22

lsaund11 opened this issue Dec 28, 2020 · 2 comments
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@athuyvo

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@lsaund11
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The UMAP plot in the bbi-sci dashboard currently has a right-adjusted legend. When there are lots of clusters, the UMAP itself is not visible because the plot is consumed by the legend. Can this be adjusted so that there is no legend and numbers overlay clusters themselves (i.e. the default in plot_cells())?

Thanks!
@hpliner
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hpliner commented Jan 6, 2021

Ok I finally remember why I changed this - basically ggrepel doesn't appear to be thread safe and causes crashes when running a bunch of samples at a time. for the moment, I just removed the legend entirely in the develop branch, but need to think about this more...

@eliza-barkan
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I am also having this issue where the entire image is just the legend because there are a lot of clusters.
Screen Shot 2024-01-25 at 11 06 23 AM

@athuyvo athuyvo self-assigned this Jan 25, 2024
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@hpliner @athuyvo @lsaund11 @eliza-barkan