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## FireCloud
### preprocess_hic
Snapshot ID 41
- Increased boot disk size for tasks that use aryeelab/hicpro
Snapshot ID 40
- Increased boot disk size for sum_fastq_size
Snapshot ID 39
- Fixed hicpro Dockerfile bug resulting in missing Hindiii resfrag files
- Increased disk size for sum_fastq_size task. TODO: replace with simpler docker image
- Use zcat -f for fastqs to allow compressed and/or uncompressed files
Snapshot ID 38
- sparseHic task: increased memory from 60GB to 104GB and use a single core
Snapshot ID 37
- Fixed missing space bug (echo`date`) in cooler task
Snapshot ID 36
- Dropped memory and disk size for hicpro_align now that iced memory leak is fixed
Snapshot ID 35
- Increased disk size for hicpro_align from 20GB to 40GB
Snapshot ID 34
- Increased memory for hicpro_contact_matrices from 60GB to 208GB
Snapshot ID 33
- Increased disk size for hicpro_contact_matrices
Snapshot ID 32
- Added sparseHiC .rds as output
Snapshot ID 31
- Specify genome_id annotation for juicebox .hic
Snapshot ID 29
- Added juicebox .hic as output
Snapshot ID 26
- Added cooler file as output
Snapshot ID 25
- Fix to allow calculation of very small fastq sizes (that use scientific notation)
Snapshot ID 24
- More accurate fastq file size calculation for many small files
### merge_hic_replicates
Snapshot ID 14
- sparseHic task: increased memory from 60GB to 104GB and use a single core
Snapshot ID 10
- Changed cis_long_range_percent num_pairs input from Int to String to match count_pairs output (to allow 2+ billion reads)