Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Is there an alternative to ZRANK1 #31

Open
Rohit-Satyam opened this issue Sep 16, 2024 · 0 comments
Open

Is there an alternative to ZRANK1 #31

Rohit-Satyam opened this issue Sep 16, 2024 · 0 comments

Comments

@Rohit-Satyam
Copy link

Rohit-Satyam commented Sep 16, 2024

Hi @akiyamalab-web @tonets

I was wondering if there is any other scoring method that is faster than Zrank because it is really slow and if I have to run it for 100 docking results (I am using megadock PPI mode) it will take forever. I am asking this because we then have to use ppiscore function from megadock and that would require meeting certain file format right?

Also, can't I add hydrogen before running megadock ? or does it have to be just for reranking?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant