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Incorporate small changes to outputs in fm.tpl in Ingrid and Carey's versions #26

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careymcg opened this issue Nov 1, 2022 · 2 comments

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@careymcg
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careymcg commented Nov 1, 2022

Ingrid and Carey have both added things like sample size to the fm.tpl outputs but these changes are not in the main branch of the repo.

@careymcg
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careymcg commented Nov 1, 2022

Also, change hardwired line in writing out Tier 3 projections to get rid of hardwired spawnmo =2 and some other hardwired outputs there (like number of sexes, number of fisheries, maxage, etc.):

projmod <<"fm_projection_model_output  "<<endl;
projmod <<"0 # SSL Species???         " <<endl;                       
projmod <<"0 # Constant  buffer  of  Dorn? " <<endl;                          
projmod <<"1 # Number  of  fsheries    "<<endl;                          
projmod <<"2 # Number  of  sexes??     "<<endl;
	double mean5yrF=0.;
	for (int iyr=endyr-5;iyr<=endyr;iyr++) 
	  mean5yrF += max(value(F_f(1,iyr)));  mean5yrF/=5.;
projmod <<mean5yrF <<" # averagei 5yr f"<<endl;
projmod << "1.0 # author  f            "<<endl;
projmod << "0.4     # SPR ABC          "<<endl;               
projmod << "0.35    # SPR MSY          "<<endl;
projmod << "2 # Spawnmo                "<<endl;
projmod << "20  # Number  of  ages     "<<endl;
projmod << "1 # Fratio                 "<<endl;
projmod << "#females first             "<<endl;

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careymcg commented Nov 9, 2022

Add Age3+ total biomass to outputs

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