dependency.R

# For an empty R environment please install them: 

install.packages("tidyverse")
install.packages("BiocManager")
install.packages("shiny")
install.packages("shinyjs")
install.packages("bslib")
install.packages("plyr")
install.packages("DT")
install.packages("readr")
install.packages("readxl")
BiocManager::install("DESeq2")
BiocManager::install("edgeR")
BiocManager::install("sva")
BiocManager::install("GSVA")
BiocManager::install("ComplexHeatmap")
BiocManager::install("Mfuzz")
install.packages("FactoMineR")
install.packages("factoextra")
BiocManager::install("org.Hs.eg.db")
BiocManager::install("org.Mm.eg.db")
install.packages("scales")
BiocManager::install("clusterProfiler")
install.packages("devtools")
devtools::install_github("zdebruine/RcppML") 
devtools::install_github('dviraran/xCell')
devtools::install_github('saezlab/decoupleR')
devtools::install_github('ievaKer/aPEAR')
BiocManager::install("ReactomePA")
install.packages("ggridges")
install.packages("ashr")
install.packages("gtools")