From fac3ff5571060965ee3a44a44f8c831ede6c2cae Mon Sep 17 00:00:00 2001 From: Erin Young Date: Fri, 1 Mar 2024 16:34:16 -0700 Subject: [PATCH] removed extra tests --- nextflow.config | 28 +++------------------------- 1 file changed, 3 insertions(+), 25 deletions(-) diff --git a/nextflow.config b/nextflow.config index 54020f7..0706ee1 100644 --- a/nextflow.config +++ b/nextflow.config @@ -18,32 +18,10 @@ profiles { singularity.autoMounts = true } test { - params.test_wf = true + params.test = true } - test1 { - params.test_wf = true - params.enable_porechop = true - } - test2 { - params.test_wf = true - params.assembler = 'raven' - } - test3 { - params.test_wf = true - params.assembler = 'miniasm' - } - test4 { - params.test_wf = true - params.assembler = 'lr_unicycler' - } - test5 { - params.test_wf = true - params.assembler = 'trycycler' - params.trycycler_min_fasta = 9 - } - test6 { - params.test_wf = true - params.assembler = 'dragonflye' + campy { + includeConfig './configs/1_5.config' } }