From f0a09ceb69eee9f8b7eb7355b79541ec936a48c5 Mon Sep 17 00:00:00 2001
From: Erin Young <erin.olde@gmail.com>
Date: Tue, 5 Mar 2024 09:45:16 -0700
Subject: [PATCH] increased cpus

---
 .github/workflows/github_actions.config | 14 +++++++-------
 1 file changed, 7 insertions(+), 7 deletions(-)

diff --git a/.github/workflows/github_actions.config b/.github/workflows/github_actions.config
index ccaecf2..1a5a13c 100644
--- a/.github/workflows/github_actions.config
+++ b/.github/workflows/github_actions.config
@@ -10,12 +10,12 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:bwa{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:circulocov{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
@@ -34,7 +34,7 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:flye{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
@@ -49,12 +49,12 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:medaka{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:multiqc{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
@@ -84,7 +84,7 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:raven{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
@@ -93,7 +93,7 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:unicycler{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}