From 599e0f3a360a84bc99e1bc3975562c0ce41b5a8b Mon Sep 17 00:00:00 2001 From: Robert Ernst Date: Tue, 3 Aug 2021 11:57:31 +0200 Subject: [PATCH 1/2] Update executor settings --- WES.config | 3 +++ 1 file changed, 3 insertions(+) diff --git a/WES.config b/WES.config index 4773b6c..48b0517 100644 --- a/WES.config +++ b/WES.config @@ -348,6 +348,9 @@ profiles { executor { queueSize = 1000 + pollInterval = '1min' + queueStatInterval = '5min' + submitRatelimit = '10sec' } } From 1424f4df55ebc7f06395aaa7b5c76eebdb4ac937 Mon Sep 17 00:00:00 2001 From: Robert Ernst Date: Tue, 3 Aug 2021 11:57:55 +0200 Subject: [PATCH 2/2] Set VerifyBamID cpus to 2. --- WES.config | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/WES.config b/WES.config index 48b0517..1580691 100644 --- a/WES.config +++ b/WES.config @@ -300,7 +300,7 @@ process { } withLabel: VERIFYBAMID_2_0_1_h32f71e1_2_VerifyBamID2 { - cpus = 1 + cpus = 2 memory = '5G' time = '1h'