From 21ef07d7e7776bab815480294a55c5d4c2fd4a61 Mon Sep 17 00:00:00 2001
From: John Shiu <asbjchk.academic@gmail.com>
Date: Fri, 21 Jun 2024 17:13:22 -0700
Subject: [PATCH] fixed images in proposal

---
 report/docs/report/final_report.html | 46 ++++++++++++++--------------
 report/docs/robots.txt               |  1 +
 report/docs/sitemap.xml              | 11 +++++++
 report/proposal.qmd                  |  2 +-
 4 files changed, 36 insertions(+), 24 deletions(-)
 create mode 100644 report/docs/robots.txt
 create mode 100644 report/docs/sitemap.xml

diff --git a/report/docs/report/final_report.html b/report/docs/report/final_report.html
index 62dfb8c..4f56f25 100644
--- a/report/docs/report/final_report.html
+++ b/report/docs/report/final_report.html
@@ -402,7 +402,7 @@ <h3 class="anchored" data-anchor-id="evaluation-results">Evaluation Results</h3>
 <span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a>gt <span class="op">=</span> pd.read_csv(<span class="st">'../data/processed/ground_truth.csv'</span>)</span>
 <span id="cb1-3"><a href="#cb1-3" aria-hidden="true" tabindex="-1"></a>gt</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 </details>
-<div class="cell-output cell-output-display" data-execution_count="1">
+<div class="cell-output cell-output-display" data-execution_count="6">
 <div>
 
 
@@ -540,26 +540,26 @@ <h3 class="anchored" data-anchor-id="evaluation-results">Evaluation Results</h3>
 <span id="cb2-52"><a href="#cb2-52" aria-hidden="true" tabindex="-1"></a>    titleFontSize<span class="op">=</span><span class="dv">12</span></span>
 <span id="cb2-53"><a href="#cb2-53" aria-hidden="true" tabindex="-1"></a>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 </details>
-<div class="cell-output cell-output-display" data-execution_count="2">
+<div class="cell-output cell-output-display" data-execution_count="7">
 
 <style>
-  #altair-viz-2e51836bde5f498c91a72176f891a9a9.vega-embed {
+  #altair-viz-1999d76b84e542058601d1322c45e9f7.vega-embed {
     width: 100%;
     display: flex;
   }
 
-  #altair-viz-2e51836bde5f498c91a72176f891a9a9.vega-embed details,
-  #altair-viz-2e51836bde5f498c91a72176f891a9a9.vega-embed details summary {
+  #altair-viz-1999d76b84e542058601d1322c45e9f7.vega-embed details,
+  #altair-viz-1999d76b84e542058601d1322c45e9f7.vega-embed details summary {
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-<div id="altair-viz-2e51836bde5f498c91a72176f891a9a9"></div>
+<div id="altair-viz-1999d76b84e542058601d1322c45e9f7"></div>
 <script type="text/javascript">
   var VEGA_DEBUG = (typeof VEGA_DEBUG == "undefined") ? {} : VEGA_DEBUG;
   (function(spec, embedOpt){
     let outputDiv = document.currentScript.previousElementSibling;
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-      outputDiv = document.getElementById("altair-viz-2e51836bde5f498c91a72176f891a9a9");
+    if (outputDiv.id !== "altair-viz-1999d76b84e542058601d1322c45e9f7") {
+      outputDiv = document.getElementById("altair-viz-1999d76b84e542058601d1322c45e9f7");
     }
     const paths = {
       "vega": "https://cdn.jsdelivr.net/npm/vega@5?noext",
@@ -631,7 +631,7 @@ <h3 class="anchored" data-anchor-id="evaluation-results">Evaluation Results</h3>
 <span id="cb3-13"><a href="#cb3-13" aria-hidden="true" tabindex="-1"></a>contingency_table.index.names <span class="op">=</span> [<span class="st">'Repository'</span>, <span class="st">'Checklist Item'</span>, <span class="st">'Ground Truth'</span>]</span>
 <span id="cb3-14"><a href="#cb3-14" aria-hidden="true" tabindex="-1"></a>contingency_table.sort_index(level<span class="op">=</span>[<span class="dv">0</span>, <span class="dv">2</span>])</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 </details>
-<div class="cell-output cell-output-display" data-execution_count="3">
+<div class="cell-output cell-output-display" data-execution_count="8">
 <div>
 
 
@@ -816,26 +816,26 @@ <h3 class="anchored" data-anchor-id="evaluation-results">Evaluation Results</h3>
 <span id="cb4-42"><a href="#cb4-42" aria-hidden="true" tabindex="-1"></a>    title<span class="op">=</span><span class="st">"30 Runs on Openja's Repositories for each Checklist Item"</span></span>
 <span id="cb4-43"><a href="#cb4-43" aria-hidden="true" tabindex="-1"></a>) </span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 </details>
-<div class="cell-output cell-output-display" data-execution_count="4">
+<div class="cell-output cell-output-display" data-execution_count="9">
 
 <style>
-  #altair-viz-76f736c12da445dbb517ce132d68e98d.vega-embed {
+  #altair-viz-a5a0777d203546aeaa42f821ea918c6b.vega-embed {
     width: 100%;
     display: flex;
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-  #altair-viz-76f736c12da445dbb517ce132d68e98d.vega-embed details summary {
+  #altair-viz-a5a0777d203546aeaa42f821ea918c6b.vega-embed details,
+  #altair-viz-a5a0777d203546aeaa42f821ea918c6b.vega-embed details summary {
     position: relative;
   }
 </style>
-<div id="altair-viz-76f736c12da445dbb517ce132d68e98d"></div>
+<div id="altair-viz-a5a0777d203546aeaa42f821ea918c6b"></div>
 <script type="text/javascript">
   var VEGA_DEBUG = (typeof VEGA_DEBUG == "undefined") ? {} : VEGA_DEBUG;
   (function(spec, embedOpt){
     let outputDiv = document.currentScript.previousElementSibling;
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-      outputDiv = document.getElementById("altair-viz-76f736c12da445dbb517ce132d68e98d");
+    if (outputDiv.id !== "altair-viz-a5a0777d203546aeaa42f821ea918c6b") {
+      outputDiv = document.getElementById("altair-viz-a5a0777d203546aeaa42f821ea918c6b");
     }
     const paths = {
       "vega": "https://cdn.jsdelivr.net/npm/vega@5?noext",
@@ -960,26 +960,26 @@ <h4 class="anchored" data-anchor-id="comparison-of-gpt-3.5-turbo-and-gpt-4o">Com
 <span id="cb5-55"><a href="#cb5-55" aria-hidden="true" tabindex="-1"></a>    titleFontSize<span class="op">=</span><span class="dv">12</span></span>
 <span id="cb5-56"><a href="#cb5-56" aria-hidden="true" tabindex="-1"></a>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 </details>
-<div class="cell-output cell-output-display" data-execution_count="5">
+<div class="cell-output cell-output-display" data-execution_count="10">
 
 <style>
-  #altair-viz-7bb302ef75b745b78e688e47a21a7c6a.vega-embed {
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     width: 100%;
     display: flex;
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-  #altair-viz-7bb302ef75b745b78e688e47a21a7c6a.vega-embed details,
-  #altair-viz-7bb302ef75b745b78e688e47a21a7c6a.vega-embed details summary {
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     position: relative;
   }
 </style>
-<div id="altair-viz-7bb302ef75b745b78e688e47a21a7c6a"></div>
+<div id="altair-viz-8cc4c4e5769643588ef22330585b69e2"></div>
 <script type="text/javascript">
   var VEGA_DEBUG = (typeof VEGA_DEBUG == "undefined") ? {} : VEGA_DEBUG;
   (function(spec, embedOpt){
     let outputDiv = document.currentScript.previousElementSibling;
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-      outputDiv = document.getElementById("altair-viz-7bb302ef75b745b78e688e47a21a7c6a");
+    if (outputDiv.id !== "altair-viz-8cc4c4e5769643588ef22330585b69e2") {
+      outputDiv = document.getElementById("altair-viz-8cc4c4e5769643588ef22330585b69e2");
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     const paths = {
       "vega": "https://cdn.jsdelivr.net/npm/vega@5?noext",
diff --git a/report/docs/robots.txt b/report/docs/robots.txt
new file mode 100644
index 0000000..183be83
--- /dev/null
+++ b/report/docs/robots.txt
@@ -0,0 +1 @@
+Sitemap: https://UBC-MDS.github.io/fixml/sitemap.xml
diff --git a/report/docs/sitemap.xml b/report/docs/sitemap.xml
new file mode 100644
index 0000000..9394dd7
--- /dev/null
+++ b/report/docs/sitemap.xml
@@ -0,0 +1,11 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9">
+  <url>
+    <loc>https://UBC-MDS.github.io/fixml/report/proposal.html</loc>
+    <lastmod>2024-06-22T00:11:21.453Z</lastmod>
+  </url>
+  <url>
+    <loc>https://UBC-MDS.github.io/fixml/report/final_report.html</loc>
+    <lastmod>2024-06-22T00:11:20.477Z</lastmod>
+  </url>
+</urlset>
diff --git a/report/proposal.qmd b/report/proposal.qmd
index b3e1a6a..606dca1 100644
--- a/report/proposal.qmd
+++ b/report/proposal.qmd
@@ -36,7 +36,7 @@ We propose to develop testing suites diagnostic tools based on Large Language Mo
 
 Our solution offers an end-to-end application for evaluating and enhancing the robustness of users' ML systems.
 
-![Main components and workflow of the proposed system. The checklist would be written in [YAML](https://yaml.org/) to maximize readability for both humans and machines. We hope this will encourage researchers/users to read, understand and modify the checklist items, while keeping the checklist closely integrated with other components in our system.](img/proposed_system_overview.png)
+![Main components and workflow of the proposed system. The checklist would be written in [YAML](https://yaml.org/) to maximize readability for both humans and machines. We hope this will encourage researchers/users to read, understand and modify the checklist items, while keeping the checklist closely integrated with other components in our system.](../img/proposed_system_overview.png)
 
 One big challenge in utilizing LLMs to reliably and consistently evaluate ML systems is their tendency to generate illogical and/or factually wrong information known as hallucination [@zhang2023sirens].