BiocParallel errors

[navern0net]

Hi there,

Thank you for the package!
I'm currently running into an error:

Error: BiocParallel errors
1 remote errors, element index: 1
193 unevaluated and other errors
first remote error:
Error in dplyr::left_join(p2, edge, c("i", "d")): Can't join x$i with y$i due to incompatible types.

It works fine with the data you provided in the vignette (Keren_2018), but I can't get it to work with my data.
Do you have any idea what is going wrong?

R version 4.4.1 (2024-06-14)
Platform: x86_64-pc-linux-gnu
Running under: Red Hat Enterprise Linux 9.3 (Plow)
spicyR_1.16.4

Many thanks,
Ilaria

[shreyarajeshrao]

Hi Ilaria,

Thanks for reaching out. Could you try updating to spicyR 1.18? That's the latest version. If that doesn't work, could you share a subset of your data with us so we can find the issue?

Kind regards,
Shreya