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Issues list

Add build patch version
#16 opened Jul 29, 2022 by davmlaw updated Aug 26, 2022
Move up/down transcript versions from VariantGrid to cdot
#28 opened Nov 21, 2022 by davmlaw updated Nov 21, 2022
Provide python-attrs classes?
#37 opened Mar 10, 2023 by holtgrewe updated Mar 21, 2023
cdot responsible for fixing bad HGVS, allow warnings etc
#27 opened Nov 21, 2022 by davmlaw updated Apr 20, 2023
Diff coding coordinates from latest
#54 opened Aug 9, 2023 by davmlaw updated Aug 9, 2023
Historical GRCh38 refseq
#51 opened Jul 13, 2023 by davmlaw updated Aug 10, 2023
Add tests to CI
#62 opened Nov 8, 2023 by holtgrewe updated Nov 8, 2023
Create VEP-compatible releases in CI
#63 opened Nov 8, 2023 by holtgrewe updated Nov 14, 2023
Document JSON.gz files, and Transcript format
#77 opened Mar 12, 2024 by davmlaw updated Mar 12, 2024
CDS phase (offset for eg ribo slippage)
#76 opened Mar 8, 2024 by holtgrewe updated Mar 12, 2024
JSON breaking schema changes
#78 opened Mar 12, 2024 by davmlaw updated Jun 20, 2024
Do some benchmarks
#5 opened Jan 19, 2022 by davmlaw updated Jul 29, 2024
FastaSeqFetcher improvements
#84 opened Aug 26, 2024 by davmlaw updated Aug 26, 2024
Make a proper release
#85 opened Aug 26, 2024 by davmlaw updated Aug 26, 2024
Transcripts from NCBI/Ensembl API
#69 opened Jan 25, 2024 by davmlaw updated Sep 20, 2024
get_acs_for_protein_seq should return list not None
#88 opened Nov 26, 2024 by davmlaw updated Nov 26, 2024
Use Snakemake to build transcripts
#70 opened Feb 19, 2024 by davmlaw updated Dec 4, 2024
Investigate using GENCODE as a source of transcripts
#90 opened Jan 14, 2025 by davmlaw updated Jan 14, 2025
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