DESCRIPTION

Package: metanetwork
Type: Package
Title: Network meta analysis
Version: 0.1.1
Authors@R:
  c(person(given = "Pradeep",
    family = "Pugalenthi",
    role = c("aut", "cre"),
    email = "pradeep.pugalenthi@sagebase.org"),
  person(given = "Jake",
    family = "Gockley",
    role = c("ctb"),
    email = "jake.gockley@sagebase.org",
    comment = c( ORCID = "0000-0001-7993-5308")),
  person(given = "Benjamin",
    family = "Logsdon",
    email = "ben.logsdon@sagebase.org", 
    role = c("aut"),
    comment = c(ORCID = "0000-0002-0572-2569"))
  )
Description: Package to infer multiple types of coexpression network representations of high dimensional gene expression data.  Builds network ensembles, extract network statistics, and run enrichments on network features.
Depends: R (>= 3.1.0)
License: MIT + file LICENSE
LazyData: true
URL: hhttps://sage-bionetworks.github.io/metanetwork,
    https://github.com/Sage-Bionetworks/metanetwork
Encoding: UTF-8
biocViews:
Imports:
  bit64,
  Biobase,
  c3net,
  caroline,
  cluster,
  config,
  data.table,
  dplyr (>= 0.4.1),
  doParallel,
  dynamicTreeCut,
  fastcluster,
  foreach,
  fpc,
  glasso,
  glmnet (>= 2.0),
  graphics,
  grid,
  Hmisc (>= 3.15),
  igraph,
  knitr,
  lars (>= 1.2),
  linkcomm,
  magrittr,
  markdown,
  MASS,
  Matrix,
  MEGENA,
  optparse,
  randomForest (>= 4.6),
  reader,
  readr,
  rlang,
  Rmpi,
  parallel,
  parmigene,
  plyr,
  WGCNA (>= 1.46),
  stats,
  stringr,
  synapser,
  utils,
  vbsr (>= 0.0.5)
Additional_repositories:
  http://ran.synapse.org
Remotes:
  blogsdon/vbsr/vbsr,
  brian-bot/githubr
VignetteBuilder:
  knitr
RoxygenNote: 7.1.2