From 141162d00a251e832c7ca404f6764a460cbced61 Mon Sep 17 00:00:00 2001 From: Taylor Salo Date: Fri, 12 Jan 2024 12:37:28 -0500 Subject: [PATCH] Move test data files. --- BIDS_Dataset/README | 10 --- BIDS_Dataset/dataset_description.json | 7 -- .../anat/sub-01_ses-phdiff_T1w.json | 34 -------- .../anat/sub-01_ses-phdiff_T1w.nii.gz | Bin 123172 -> 0 bytes .../sub-01_ses-phdiff_acq-HASC55AP_dwi.bval | 1 - .../sub-01_ses-phdiff_acq-HASC55AP_dwi.bvec | 3 - .../sub-01_ses-phdiff_acq-HASC55AP_dwi.json | 75 ----------------- .../sub-01_ses-phdiff_acq-HASC55AP_dwi.nii.gz | Bin 6084 -> 0 bytes .../sub-01_ses-phdiff_acq-v4_magnitude1.json | 67 --------------- ...sub-01_ses-phdiff_acq-v4_magnitude1.nii.gz | Bin 2107 -> 0 bytes .../sub-01_ses-phdiff_acq-v4_magnitude2.json | 68 --------------- ...sub-01_ses-phdiff_acq-v4_magnitude2.nii.gz | Bin 2107 -> 0 bytes .../sub-01_ses-phdiff_acq-v4_phasediff.json | 71 ---------------- .../sub-01_ses-phdiff_acq-v4_phasediff.nii.gz | Bin 2106 -> 0 bytes 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b/BIDS_Dataset/README deleted file mode 100644 index f96d811a8..000000000 --- a/BIDS_Dataset/README +++ /dev/null @@ -1,10 +0,0 @@ -Heavily downsampled CS-DSI testing datasets - -This data has had some parameters changed so that there are different -parameter groups in the same key groups. - -## Changes - - - sub-01_ses-phdiff_acq-HASC55AP_dwi: EchoTime set to 0.04 from 0.089 - - sub-02_ses-phdiff_task-rest_bold: Fieldmap has been removed - - sub-03_ses-phdiff_task-rest_bold: FlipAngle set to 70 from 90 diff --git a/BIDS_Dataset/dataset_description.json b/BIDS_Dataset/dataset_description.json deleted file mode 100644 index 9ee88dbcc..000000000 --- a/BIDS_Dataset/dataset_description.json +++ /dev/null @@ -1,7 +0,0 @@ -{ - "BIDSVersion": "1.0.0", - "License": "BSD 3-clause", - "Name": "Heavily downsampled CS-DSI simulated data", - "ReferencesAndLinks": [], - "Authors": ["PennLINC", "PennBBL"] -} diff --git a/BIDS_Dataset/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.json b/BIDS_Dataset/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.json deleted file mode 100644 index b8005d8af..000000000 --- a/BIDS_Dataset/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.json +++ /dev/null @@ -1,34 +0,0 @@ -{ - "Manufacturer": "Siemens", - "ManufacturersModelName": "Prisma_fit", - "AcquisitionNumber": 1, - "InstitutionName": "HUP", - "InstitutionAddress": "Spruce_Street_3400_Philadelphia_Pennsylvania_US_19104", - "DeviceSerialNumber": "167024", - "SoftwareVersions": "syngo_MR_E11", - "ProcedureStepDescription": "MR_HEAD_WO_IV_CONTRAST", - "ScanningSequence": "GR_IR", - "SequenceVariant": "SK_SP_MP", - "SeriesDescription": "ABCD_T1w_MPR_vNav", - "BodyPartExamined": "BRAIN", - "ProtocolName": "ABCD_T1w_MPR_vNav", - "PatientName": "John Doe", - "SequenceName": "tfl3d1_16ns", - "ImageType": [ - "ORIGINAL", - "PRIMARY", - "M", - "ND", - "NORM" - ], - "AcquisitionTime": "16:15:31.770000", - "MagneticFieldStrength": 3, - "FlipAngle": 8, - "EchoTime": 0.0029, - "RepetitionTime": 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