logvol_master.yml

name: LogVOL master branch only

on:
  push:
    branches:
      - master
      - github_action
    paths-ignore:
      - '**/*.md'
      - '**/*.txt'
      - '**/*.jpg'
      - '**/*.png'
      - 'tests/*'
      - 'datasets/*'
  pull_request:
    branches: master
    paths-ignore:
      - '**/*.md'
      - '**/*.txt'
      - '**/*.jpg'
      - '**/*.png'
      - 'tests/*'
      - 'datasets/*'

env:
   HDF5_VERSION: 1.14.2
   
jobs:
    build:
      runs-on: ubuntu-latest
      timeout-minutes: 60
      steps:
        - uses: actions/checkout@v4
        - name: Set up dependencies
          run: |
            set -x
            sudo apt-get update
            sudo apt-get install automake autoconf libtool libtool-bin m4
            # zlib
            sudo apt-get install zlib1g-dev
            # OpenMPI
            sudo apt-get install openmpi-bin openmpi-common libopenmpi-dev libgtk2.0-dev
            echo "---- location of OpenMPI C compiler ----"
            which mpicc
            ompi_info
        - name: Install HDF5
          if: ${{ success() }}
          run: |
            set -x
            cd ${GITHUB_WORKSPACE}
            rm -rf HDF5 ; mkdir HDF5 ; cd HDF5
            VER_MAJOR=${HDF5_VERSION%.*}
            VER_NOPATCH=${HDF5_VERSION%-*} # remove patch version
            curl -LO https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${VER_MAJOR}/hdf5-${VER_NOPATCH}/src/hdf5-${HDF5_VERSION}.tar.gz
            tar -zxf hdf5-${HDF5_VERSION}.tar.gz
            cd hdf5-${HDF5_VERSION}
            ./configure --prefix=${GITHUB_WORKSPACE}/HDF5 \
                        --silent \
                        --enable-hl \
                        --enable-parallel \
                        --enable-build-mode=production \
                        --disable-doxygen-doc \
                        --disable-doxygen-man \
                        --disable-doxygen-html \
                        --disable-tools \
                        --disable-tests \
                        --disable-fortran \
                        --disable-cxx \
                        CC=mpicc
            make -s LIBTOOLFLAGS=--silent V=1 -j 8 install > qout 2>&1
            make -s distclean >> qout 2>&1
        - name: Dump HDF5 config.log file
          if: ${{ failure() }}
          run: |
            set -x
            cat ${GITHUB_WORKSPACE}/HDF5/hdf5-${HDF5_VERSION}/qout
            cat ${GITHUB_WORKSPACE}/HDF5/hdf5-${HDF5_VERSION}/config.log
        - name: Install Log VOL connector from its master branch
          if: ${{ success() }}
          run: |
            set -x
            cd ${GITHUB_WORKSPACE}
            rm -rf LOG_VOL ; mkdir LOG_VOL ; cd LOG_VOL
            rm -rf vol-log-based
            git clone -q https://github.com/DataLib-ECP/vol-log-based.git
            cd vol-log-based
            autoreconf -i
            ./configure --prefix=${GITHUB_WORKSPACE}/LOGVOL \
                        --silent \
                        --with-hdf5=${GITHUB_WORKSPACE}/HDF5
            make -s LIBTOOLFLAGS=--silent V=1 -j 8 install > qout 2>&1
            make -s distclean >> qout 2>&1
        - name: Dump Log VOL config.log file
          if: ${{ failure() }}
          run: |
            set -x
            cat ${GITHUB_WORKSPACE}/LOG_VOL/vol-log-based/qout
            cat ${GITHUB_WORKSPACE}/LOG_VOL/vol-log-based/config.log
        - name: Build and check E3SM_IO with HDF5 Log VOL connector only
          if: ${{ success() }}
          run: |
            set -x
            cd ${GITHUB_WORKSPACE}
            rm -rf ./test_output
            autoreconf -i
            ./configure --with-hdf5=${GITHUB_WORKSPACE}/HDF5 \
                        --with-logvol=${GITHUB_WORKSPACE}/LOGVOL \
                        CC=mpicc CXX=mpicxx \
                        CFLAGS=-fno-var-tracking-assignments \
                        CXXFLAGS=-fno-var-tracking-assignments \
                        TESTMPIRUN="mpiexec --oversubscribe"
            make -j 8
            make check
        - name: Dump log files if E3SM_IO with HDF5 Log VOL connector test failed
          if: ${{ failure() }}
          run: |
            set -x
            cd ${GITHUB_WORKSPACE}
            cat test.sh.log utils/*.log
            cat config.log
        - name: Test E3SM_IO -- parallel runs
          if: ${{ success() }}
          run: |
            set -x
            cd ${GITHUB_WORKSPACE}
            make ptest
        - name: Test make distcheck
          if: ${{ success() }}
          run: |
            set -x
            cd ${GITHUB_WORKSPACE}
            make distcheck DISTCHECK_CONFIGURE_FLAGS="--with-hdf5=${GITHUB_WORKSPACE}/HDF5 --with-logvol=${GITHUB_WORKSPACE}/LOGVOL CC=mpicc CXX=mpicxx CFLAGS=-fno-var-tracking-assignments CXXFLAGS=-fno-var-tracking-assignments"
            make distclean