apptainer.def

Bootstrap: docker
From: ubuntu:24.04

%arguments
    env_path=./environment.yml

%setup
    mkdir -p ${APPTAINER_ROOTFS}/tmp_data
    if [ -f {{ env_path }} ]; then \
        cp {{ env_path }} ${APPTAINER_ROOTFS}/tmp_data/environment.yml.tmp \
    else \
        touch ${APPTAINER_ROOTFS}/tmp_data/environment.yml.tmp; \
    fi

%post
    apt-get update && apt-get install -y \
        openjdk-17-jdk \
        maven \
        python3 \
        python3-pip \
        unzip \
        wget \
        git \
        && apt-get clean

    # Install Osmosis
    wget --quiet https://github.com/openstreetmap/osmosis/releases/download/0.48.3/osmosis-0.48.3.zip -O /tmp_data/osmosis.zip && \
    unzip /tmp_data/osmosis.zip -d /opt/osmosis && \
    rm /tmp_data/osmosis.zip && \
    ln -s /opt/osmosis/bin/osmosis /usr/local/bin/osmosis

    # Install Miniconda
    wget --quiet https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh -O /tmp_data/miniconda.sh && \
    /bin/bash /tmp_data/miniconda.sh -b -p /opt/conda && \
    rm /tmp_data/miniconda.sh

    if [ ! -s /tmp_data/environment.yml.tmp ]; then \
        wget --quiet https://raw.githubusercontent.com/eqasim-org/ile-de-france/refs/heads/develop/environment.yml -O /tmp_data/environment.yml; \
    else \
        mv /tmp_data/environment.yml.tmp /tmp_data/environment.yml; \
    fi

    # Create conda environment from environment.yml
    /opt/conda/bin/conda env create -f /tmp_data/environment.yml -n eqasim && \
    rm /tmp_data/environment.yml

%environment
    export DEBIAN_FRONTEND=noninteractive
    export PATH=/opt/conda/bin:$PATH

    source /opt/conda/bin/activate eqasim

%runscript
    exec python -m synpp "$@"